Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03197 ATGGCTCTTAACACTAGCTTGAGATGTTTGGCAATGGTTGCCCTTGCATTTTTCGTTACAGTGCAAGGAACTCTTGGGGCGATAGAATGCGAGCGTTTGGATGAGGACACGTGTGCGTTTGCGGTGTCGTGGGAGGGCAAACGGTGCGTATTGGAGAAGCGTGTGAAGAGGAGCGGGGAAGAAGCTTACACGTGCAGGACTTCAGAGATCGAAACAGAAACGCAAACGGGGCACATTGAAACAGATGAATGCATAAAGGGTTGTGGTTTGAACAGAAAATCCTTCGGAATCTCTTCAGACTCTCTTCTTGAATCTGGGTTCACGCAAAACCTCTGCTCCCCTCACTGCTACGAAACCTGCCCCAACATCGTTGATCTCTTCTTCAACCTTGCAGCTGGTGAAGGTGTGTTTCTTCCGAAACTGTGTGCATCACAAGGTCGTAGAGAAATGGCTGAGATCAAAAGCTCCGGTATAGTAGCACCAGGACCAGTGAACTCTCTGCAATTCACTGCAACTCCTCCACAACCTTTCGATGCTGTGGAACTCGCTCATGAACCTGCGCTTGCACCATTCCTGCAGTACTAA 585 0.4923 MALNTSLRCLAMVALAFFVTVQGTLGAIECERLDEDTCAFAVSWEGKRCVLEKRVKRSGEEAYTCRTSEIETETQTGHIETDECIKGCGLNRKSFGISSDSLLESGFTQNLCSPHCYETCPNIVDLFFNLAAGEGVFLPKLCASQGRREMAEIKSSGIVAPGPVNSLQFTATPPQPFDAVELAHEPALAPFLQY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03197 194 Pfam PAR1 protein 28 190 IPR009489 -
Spst4g03197 194 PANTHER PAR1 PROTEIN 10 190 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03197 Spst-Chr4 71590714 71592139 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03197 - - gmx:100778782 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03197 4 71590714 71592139 Spst4g03197 4 71590714 71592139 ECH
Spst4g03197 4 71590714 71592139 Spst10g00965 10 10366930 10367684 PCT