Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03190 ATGGGTATGTCAAACACTGAAGAGTTACATTTCATTGGATTGGATGAAGATTTATGTATGCAGAATTTCAACAAAGCACTTCATTCTTTGATTTCTGGTCCTACACCACCACAACGTTATGCAGCTAGCATCATGGTGTGTACAAGTCCAACAAAGAAAAGAGAAAAGAATATGATAGAGGTGAGAGTTCCAAATCTTGATTGTGAAGGATGTGCTTCAAAACTAAAGAAAGCTCTCTTCAAGCTCAAAGGGGTAGATGAGGTAGAAGTTGAAATGGAATCTCAAAAAATAACAGTGAGGGGCTATGGCTTGGAGGAAAAGAAGGTTCTCAAGGCAATCAAACGTGCAGGGAAAGTAGCAGAACCATGGCCATTTCCAGGGCATGCTCATTTTTCCTCATTTTACAAGTACCCTAGTTACATTGTTAACCATTACTATGATGCATACAAAAGTGAAGCAACCAATGGAGTCCATACTTTCTTCCACACCCCTGCAGTGTACTCAGTTGCTGTGGCATCTGATGAAGCCTTTGCTTCTCTCTTCAGTGATGATAACCCCCATGCTTGCACTATAATGTAA 579 0.4041 MGMSNTEELHFIGLDEDLCMQNFNKALHSLISGPTPPQRYAASIMVCTSPTKKREKNMIEVRVPNLDCEGCASKLKKALFKLKGVDEVEVEMESQKITVRGYGLEEKKVLKAIKRAGKVAEPWPFPGHAHFSSFYKYPSYIVNHYYDAYKSEATNGVHTFFHTPAVYSVAVASDEAFASLFSDDNPHACTIM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03190 192 Pfam Heavy-metal-associated domain 61 118 IPR006121 GO:0046872
Spst4g03190 192 ProSiteProfiles Heavy-metal-associated domain profile. 57 121 IPR006121 GO:0046872
Spst4g03190 192 Gene3D - 53 120 - -
Spst4g03190 192 CDD HMA 60 121 IPR006121 GO:0046872
Spst4g03190 192 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 59 189 IPR045181 GO:0046872
Spst4g03190 192 SUPERFAMILY HMA, heavy metal-associated domain 58 123 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03190 Spst-Chr4 71498286 71501298 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03190 - - gmx:100802676 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03190 4 71498286 71501298 Spst4g03190 4 71498286 71501298 ECH