Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03174 ATGGCTCTGCAACTGTGGGAGACACTGAAGGAAGCCATAATTGCCTACACCGGCCTCTCTCCGCCCACGTTCTTCACCCTCCTTGCCCTAATCCTCGCCCTCTACTACGTCGTTTCTGGTCTCTTCCCCTCCTCCGACCACCGCCACGACGCCCACCGTGACTTCGAGCCCCAGATGGAGCCTCTGCGACCCCCCGTTCAGATCGGCGAGGTCACCGAGGAGGAACTCAAGGCCTACGACGGCTCTGACCCCGCGAAGCCCCTCCTCATGGCCATCAAGGGTCAGATCTATGATGTTTCGCAGAGCAGAATGTTTTATGGACCGGGTGGACCCTATGCTCTATTTGCTGGCAAGGATGCTAGCAGAGCTTTGGCCAAAATGTCTTTTGAAGAGAAAGATCTAACAGGAGATATCTCTGGTCTTGGCCCATTTGAGCTTGAGGCCTTGCAAGACTGGGAATACAAGTTTATGGGCAAGTATGTAAAAGTTGGAACTGTCAAAACGACTGTTCCAGTGACTGAACCATCAGAATCAACGCCCCATGATGCTGAATCTTCCAAGCCTACTGAAGATGGTGCATCAGAATCAGCAGCTGTTAAAAATGACGAAATCCCCTCAAAGGTTGATGCTGATAAAGAGTGA 642 0.5202 MALQLWETLKEAIIAYTGLSPPTFFTLLALILALYYVVSGLFPSSDHRHDAHRDFEPQMEPLRPPVQIGEVTEEELKAYDGSDPAKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMGKYVKVGTVKTTVPVTEPSESTPHDAESSKPTEDGASESAAVKNDEIPSKVDADKE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03174 213 MobiDBLite consensus disorder prediction 169 213 - -
Spst4g03174 213 FunFam Membrane steroid-binding protein 1 69 167 - -
Spst4g03174 213 Gene3D - 69 167 IPR036400 -
Spst4g03174 213 Pfam Cytochrome b5-like Heme/Steroid binding domain 72 166 IPR001199 -
Spst4g03174 213 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 23 180 - -
Spst4g03174 213 SMART Cyt_b5_2 71 167 IPR001199 -
Spst4g03174 213 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 64 167 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03174 Spst-Chr4 71349401 71352899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03174 K17278 - gmx:100780914 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03174 4 71349401 71352899 Spst4g03174 4 71349401 71352899 ECH
Spst4g03174 4 71349401 71352899 Spst10g00995 10 10605100 10607273 PCT