Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03146 ATGGACTCCACCGCACAGGTGACTAAAACGCCATCGTTCTGGACGGACGAAAAGCACATGCACTTCCTTAACACTATGGAAGCATCCTTTGTGCGTGCAATGCTGGAAAACCAAGGAACCTCCAACCCCAGTCCCACGCACCACTCTCTGCGCCTCGACCGTTATCTTCCCGACACCTTCGATTCCACTTTGGATTTGAAACCGCATCCTCACCGCATCAGAAAGCTCCATGCCCCGGCAGATTCAATAGGTCCAAGATCTAGACCGAGGAAAAGATCATCCCAGCCCTGCAATTCGTCACAGGATCAGGTTGGGGTGTGTGCAAACAATAGAGGAACACAGTGTTCACCCATGAAACAAGGTGACATCTCACCATACATATGTGAGCAAAAATGGCGACAAGAACAACAGAAGTCACTTTCCTTTGCCACCAAGTTCTCTTCTCGTTCTTGGAAAAGTACCGGTGCGAGCTTCAACTCACGAGTGGAATCTACGCAACAACGTGCACTCCAATTGGCACTGGTGAAGAAGGAAGAATTTTGGTATATCATGGAGTCAAAAGATAGTAATGTTGGTGATGAAATCACGAGGATTTCAAAAAGGTAA 606 0.4769 MDSTAQVTKTPSFWTDEKHMHFLNTMEASFVRAMLENQGTSNPSPTHHSLRLDRYLPDTFDSTLDLKPHPHRIRKLHAPADSIGPRSRPRKRSSQPCNSSQDQVGVCANNRGTQCSPMKQGDISPYICEQKWRQEQQKSLSFATKFSSRSWKSTGASFNSRVESTQQRALQLALVKKEEFWYIMESKDSNVGDEITRISKR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03146 201 PANTHER COLD REGULATED PROTEIN 27 9 119 IPR044678 GO:0009409|GO:0042752
Spst4g03146 201 MobiDBLite consensus disorder prediction 89 105 - -
Spst4g03146 201 MobiDBLite consensus disorder prediction 66 105 - -
Spst4g03146 201 MobiDBLite consensus disorder prediction 66 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03146 Spst-Chr4 70917453 70928462 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03146 - - gmx:100783074 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03146 4 70917453 70928462 Spst4g03146 4 70917453 70928462 ECH