Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03142 ATGCTTTGCTTTGTGGTGGTTCGGGTATTGACTCGTTACCTGCTAAATCGAACTACCAAAACCCTAAACCCTAAAATGCGAGTCTTCGCTTACCGAGCCTCCTGCTTCTTCAAGCGCAATCACGAGAATTCCCCGTACAACCCTATTTTTAACTTCTTCAGAGAATTCGCTCAATCCACTGCAATTCCCAAAAAGCAACTTAGGGTTCGCGACCATGGCTACGACAACTACATGGAAGTGGAGAAGAAAATGCGCAAGGTCCTCAAATTCCAGAGCCTCATCCTCTCCGAGCCCACCCAATCGCTCCCAATCTCGCGCCTCGAAACCCTTGCACGCCGCTTCGGCTTCACGCGCTACGAAGCCGGCGCATTCGTTGTAAAGTTCCCGCACATCTTCGAAATCTTCGAGCATCCTGTCCAGCGTATCCTCTTCTGCCGCCTCACCCGCAAGGCCATCCTCCAGATCCAGCAGGAGCGCCACGCGCTCGCGGAGCAGATCCCACTCGCCGTCACGCGGCTCCGTAAGCTTCTCCTGATGACGAACGAAGGCAGGCTCCGCCTCGAACACGTGCGCATCGCACGCGCCGCCTTCGGGCTCCCCGACGACTTCGAAAACTCGGTGGTTCTGAGGTACCCGCAGAATTTCCGTTTGATTGATGCCAATGAAACTAGGATGAAGTACATTGAGGTTGTGGAGGCAGACCCTAGGCTAAGGACTTGTGCAATTGAGGAGCTTAGGGAGAGGGTTTATAGAGAGAGAGGTGGTGATGCTGAGGATATTAGGTTTTCTTTTATGATTGATTTTCCACCTGGTTTTAAGATTGGCAAGTATTTTAGGATTGCTATGTGGAAGTGGCAGAGGCTTCCGTATTGGTCCCCCTATGAGGATGTTTCTGGGTATGATCTGAGGTCCATTGAGGCCCAGAAGAGGATGGAGAAGAGGGCTGTTGCCACTATTCATGAGTTGTTGTCGTTGACTGTGGAGAAGAAGATTACGTTGGAGCGGATCGCACATTTCCGGATGGCGATGAACCTGCCCAAGAGGTTGAAGGATTTCCTGCTCCAGCACCAGGGTATTTTCTATATCTCCACCAGGGGGAATCAGGGGAAGCTTCACACTGTTTTCCTCCGGGAGGCATATAGGAAAGGCGAGCTGATTGAGCCGAATGAGTTGTATTTGGCGCGGAGGAAACTGGCTGAGCTCGTCCTGTTGAGTCCCCGGAAAGCCAAGGTTGACAGGGAGTTGGTTGGGTATAGGAGAAGCAGGTTAGAGGACGAAATGGGGCAGGTAACAAGGACGTATGTGGAGGATGCTTGTGAAGACTTTAAGGGGGAAGATCGTGTGGGGCTGGATAAGAATGCAGAGGATGATTTGACATCAGATATAGGTTCTGATGTTGATTTGGGAGATGAAGATGATGATTTTGTGGATAGTGTATAA 1440 0.5097 MLCFVVVRVLTRYLLNRTTKTLNPKMRVFAYRASCFFKRNHENSPYNPIFNFFREFAQSTAIPKKQLRVRDHGYDNYMEVEKKMRKVLKFQSLILSEPTQSLPISRLETLARRFGFTRYEAGAFVVKFPHIFEIFEHPVQRILFCRLTRKAILQIQQERHALAEQIPLAVTRLRKLLLMTNEGRLRLEHVRIARAAFGLPDDFENSVVLRYPQNFRLIDANETRMKYIEVVEADPRLRTCAIEELRERVYRERGGDAEDIRFSFMIDFPPGFKIGKYFRIAMWKWQRLPYWSPYEDVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKRLKDFLLQHQGIFYISTRGNQGKLHTVFLREAYRKGELIEPNELYLARRKLAELVLLSPRKAKVDRELVGYRRSRLEDEMGQVTRTYVEDACEDFKGEDRVGLDKNAEDDLTSDIGSDVDLGDEDDDFVDSV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03142 479 Pfam Plant organelle RNA recognition domain 69 405 IPR021099 GO:0003723
Spst4g03142 479 MobiDBLite consensus disorder prediction 453 479 - -
Spst4g03142 479 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 57 424 IPR045040 GO:0003723
Spst4g03142 479 MobiDBLite consensus disorder prediction 460 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03142 Spst-Chr4 70852249 70862782 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03142 - - gmx:100782167 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03142 4 70852249 70862782 Spst4g03142 4 70852249 70862782 ECH