Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03058 ATGCGTCGAATTTCTCACAAGAAATCGTGTAGTATCATGCATACTGCAAATGCAGCAACAGGCACAGAGAATACCCCTGCCCTCAAAACCTCACTCTTTGTTTCTCCTTTCTCTCTTCATCTCTTGCCAATGGCTTCCATCCCCACTCTTTCTCCTTCCCTACCCACACTTTCTCCTTCCCTACCCACACTTTCTCCTCACTCTTCACTCCATTCAAACCCCAACCACTGCACTCTCCCTCTCACCTCTCTCTTTGGCACCAGGATCACCCTCCAACGCGCCACCTCATCGTCCCGTTCTCTACCCAACACCAATTGCCGTGCTACGTCAGCAACAGTGTCGTTTAGCCTCCCCACCCCGAAACCTATTTCTGATGCGCCAGAGAAAACCCCAAAGTGGTCCGCGAGGGCTATAAAATCGTATGCAATGGCGGAGTTGGAAGCGAGGAGGATAAAGTTTCCCAACACGGGAACCGAGACTCTTCTAATGGGGATTTTGATTGAAGGAACAAGTCGAGCTGCCAAATTTTTAAGAGCTAATGGAATTACTCTTTTCAAAGTACGAGAAGAAACAATAAAGCTACTTGGGAAATCTGACTTGTTTTATTTCAGCCCTGAGCATCCTCCTTTGACTGAACCAGCCCAGTCAGCCCTTGATTGGGCAATTGAGGAGAAATTGAAGTCAGGAGAAGGAGGAGAAATAAACGTGACACATATACTTCTAGGAATTTGGTCACAAAAAGAATCAGCAGGTCAACAGATCATGGCTGCTCTAGGTTTCAATGATGAAAAAGCCAAAGAACTTGCTAAAACAATTGATGGAGATGTTGATTTGAGTTTCAAAAGGCAAACATGA 855 0.4585 MRRISHKKSCSIMHTANAATGTENTPALKTSLFVSPFSLHLLPMASIPTLSPSLPTLSPSLPTLSPHSSLHSNPNHCTLPLTSLFGTRITLQRATSSSRSLPNTNCRATSATVSFSLPTPKPISDAPEKTPKWSARAIKSYAMAELEARRIKFPNTGTETLLMGILIEGTSRAAKFLRANGITLFKVREETIKLLGKSDLFYFSPEHPPLTEPAQSALDWAIEEKLKSGEGGEINVTHILLGIWSQKESAGQQIMAALGFNDEKAKELAKTIDGDVDLSFKRQT 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03058 284 ProSiteProfiles Clp repeat (R) domain profile. 127 275 IPR004176 -
Spst4g03058 284 Gene3D - 132 279 IPR036628 -
Spst4g03058 284 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 55 280 IPR044217 -
Spst4g03058 284 Pfam Clp amino terminal domain, pathogenicity island component 233 270 IPR004176 -
Spst4g03058 284 Pfam Clp amino terminal domain, pathogenicity island component 155 196 IPR004176 -
Spst4g03058 284 SUPERFAMILY Double Clp-N motif 132 274 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03058 Spst-Chr4 69923972 69932488 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03058 - - gmx:100802336 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03058 4 69923972 69932488 Spst4g03058 4 69923972 69932488 ECH