Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03053 ATGGCAACAATCAAGGTCGTTAAGGCTCGCCAGATCTTCGACAGCCGCGGAAATCCCACCGTTGAAGTTGACGTTACTCTCAGCGATGGAACCTTCGCCAGAGCCGCTGTGCCCAGCGGTGCATCAACAGGTGTTTATGAGGCTCTGGAATTGAGGGATGGAGGCTCGGACTACCTTGGCAAAGGTGTTACCAAGGCTGTGGAGAATGTGAATACAGTTATAGCCCCTGCTCTGATTGGGAAGGACCCAACCAACCAGACTGAAATTGACAATTATATGGTACAGCAGCTTGATGGAACTGTTAACGAGTGGGGCTGGTGCAAGCAGAAGCTGGGAGCCAATGCTATTTTGGCAGTGTCACTTGCTGTCTGTAAGGCTGGTGCTTCAGTGAAAAAAATTCCTCTGTACAAGCACATTGCCAATCTGGCTGGAAACAAGACTTTGGTACTGCCTGTACCTTCATTCAATGTTATCAATGGAGGTTCACATGCAGGAAATAAACTAGCAATGCAGGAATTTATGATTCTCCCGGTTGGGGCATCTTCCTTCAAAGAAGCAATGAAAATGGGCGTGGAAGTATACCATCATCTGAAGTCTGTGATTAAAAAGAAGTATGGACAGGATGCTACTAACGTGGGTGATGAAGGTGGCTTTGCTCCTAATATCCAGGAAAACAAAGAAGGTCTTGAACTTCTGAAGACTTCCATTTCCCAAGCTGGTTACACTGGAAAGGTTGTAATTGGTATGGATGTTGCTGCTTCAGAATTTTATAATAACAAGGACAAAACATATGACTTGAATTTTAAGGAAGAGAATAATGATGGATCGCAGAAAATCTCAGGCGATAGCTTAAAGAATGTGTACAAATCATATGTGACAGATTATCCAATTGTGTCTATTGAGGATCCATTTGATCAGGATGACTGGGAGAACTATGCAAAATTAACATCTGAAATTGGAGAAAAAGTGCAGATTGTTGGTGATGATCTCCTCGTCACCAACCCGAAGCGTGTGGAGAAAGCCATTAAGGAGAAGGCTTGCAATGCTCTTCTGTTGAAGGTGAATCAAATTGGTAGTGTAACTGAAAGTATTGAAGCTGTGAGAATGTCTAAACGAGCTGGTTGGGGTGTCATGACTAGCCACCGGAGTGGTGAAACTGAGGATACCTTCATCGCCGACCTCGCAGTTGGGTTATCAACTGGTCAGATCAAGACAGGAGCTCCCTGCCGATCTGAAAGGCTTGCCAAGTACAACCAGCTTCTGAGGATTGAGGAGGAACTTGGATCAGATGCTGTGTATGCTGGTTCCAAATTCAGAGCCCCAGTTGAGCCCTACTGA 1338 0.4514 MATIKVVKARQIFDSRGNPTVEVDVTLSDGTFARAAVPSGASTGVYEALELRDGGSDYLGKGVTKAVENVNTVIAPALIGKDPTNQTEIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGASVKKIPLYKHIANLAGNKTLVLPVPSFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTSISQAGYTGKVVIGMDVAASEFYNNKDKTYDLNFKEENNDGSQKISGDSLKNVYKSYVTDYPIVSIEDPFDQDDWENYAKLTSEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVRMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSDAVYAGSKFRAPVEPY 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03053 445 Gene3D - 133 444 IPR036849 -
Spst4g03053 445 PANTHER ENOLASE 3 439 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 SUPERFAMILY Enolase N-terminal domain-like 3 144 IPR029017 -
Spst4g03053 445 Pfam Enolase, C-terminal TIM barrel domain 148 440 IPR020810 -
Spst4g03053 445 Pfam Enolase, N-terminal domain 4 139 IPR020811 -
Spst4g03053 445 ProSitePatterns Enolase signature. 350 363 IPR020809 -
Spst4g03053 445 FunFam Enolase 1 133 443 - -
Spst4g03053 445 SFLD enolase 1 427 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 SMART Enolase_N_3 4 139 IPR020811 -
Spst4g03053 445 PRINTS Enolase signature 327 338 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 PRINTS Enolase signature 350 364 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 PRINTS Enolase signature 169 182 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 PRINTS Enolase signature 37 51 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 PRINTS Enolase signature 379 396 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 PRINTS Enolase signature 112 128 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 FunFam Enolase 1 132 - -
Spst4g03053 445 SFLD Enolase 1 427 - -
Spst4g03053 445 PIRSF Enolase 1 440 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 Gene3D - 1 131 IPR029017 -
Spst4g03053 445 SUPERFAMILY Enolase C-terminal domain-like 147 441 IPR036849 -
Spst4g03053 445 CDD enolase 7 426 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 Hamap Enolase [eno]. 2 427 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Spst4g03053 445 SMART Enolase_C_3 147 441 IPR020810 -
Spst4g03053 445 NCBIfam phosphopyruvate hydratase 4 438 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03053 Spst-Chr4 69891335 69895553 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03053 K01689 - gmx:100787663 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03053 4 69891335 69895553 Spst4g03053 4 69891335 69895553 ECH