Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03040 ATGAAGCCTTCTGTGCTGCGTTTGTCACTGCTTGTTCTTGTTCCTCTGCTTCTCTCCCTCTTCTTTTTAGCACTCATGCCTAAGGAAACCGCCATGAGTACCTACGAGGTGTTTGGAGTGAAGATAGAGAAGAACCCACCTCAGTCTAAACTCACTGAACTTGGAGTCTCAACTTGGAACAAGTGGGAAGGTGGTCCAACCAAAATTCCATGGTCCTTTAAAGAAGAAGAGACTATGTATCTGCTGGAAGGAAAAGTGAGGGTTACTGTTGAAGGGTCTGTAGGTTCTTTTGAAATTGGGGGTGGTGATTTAGTTGTCTTCCCAAAAGGAATGAACATTACCTGGGAAGTTATTGAAGCTGTGAAGAAGCACTACAGCTTGAAAGAATAA 390 0.4359 MKPSVLRLSLLVLVPLLLSLFFLALMPKETAMSTYEVFGVKIEKNPPQSKLTELGVSTWNKWEGGPTKIPWSFKEEETMYLLEGKVRVTVEGSVGSFEIGGGDLVVFPKGMNITWEVIEAVKKHYSLKE 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03040 129 PANTHER OS04G0445200 PROTEIN 32 128 - -
Spst4g03040 129 CDD cupin_TM1112-like 58 127 - -
Spst4g03040 129 Gene3D Jelly Rolls 28 127 IPR014710 -
Spst4g03040 129 SUPERFAMILY RmlC-like cupins 48 125 IPR011051 -
Spst4g03040 129 Coils Coil 127 129 - -
Spst4g03040 129 Pfam EutQ-like cupin domain 52 125 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03040 Spst-Chr4 69787987 69790555 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03040 K06995 - gmx:100807654 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03040 4 69787987 69790555 Spst4g03040 4 69787987 69790555 ECH