Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03019 ATGGCGTTGAAGGACACATTCTACATATCTCATGGATCACCCACCTTGTCCATTGATGAATCCATTAAAGCTAGGAAGTTCCTTCAGTCATGGAAGAAGGAGGTGTTTCCTCACAGACCCTCTTCAATTCTCGTCATTTCTGGTCATTGGGACACCACAGTTCCTACTGTTAACGTAGTTGACTCCGTCAACGACACCATCTATGACTTCTACGGATTTCCCAAACAAATGTACCAGCTTAAATATCCTGCACCTGGAGCACCACAATTGGCAAGGAGGGTGAAAGAACTTCTCAGAAAATCCGGTTTCAACCGTGTTGATGAAGATACAAGCCGAGGGCTTGACCATGGTGCTTGGGTTCCTCTCCTTTTGATGTACCCAGAAGCTGATATTCCAGTTTGTCAGCTATCTGTTCAATCAAACAAAGATGGAACTTATCATTATAACTTGGGAAAGGCCTTGGCCCCTCTTAAAGATGAAGGTGTATTGATCATGGGTTCTGGAAGTGCTGTTCACAACTTGAGAACAATTAATCCAAATTCCACTGTTGATCCCTGGGCTCTAGAATTTGATAATTGGTTGAAAGATGCTCTTCTTGAAGGAAGATATGAAGATGTAAATCACTATGAACAGAAAGCGCCACATGCAAAAAAGGCTCATCCCTGGCCGGATCACTTTTATCCGCTGCATGTTGCTGTTGGTGCTGCTGGTGAAAATGCAAAGGCCAAACTTATCCACAGTAGTATTGAATATGGCAGTCTCTCTTATGCTTCTTATCAGTTTACATCTGTAGCTGACAGTTGA 804 0.4303 MALKDTFYISHGSPTLSIDESIKARKFLQSWKKEVFPHRPSSILVISGHWDTTVPTVNVVDSVNDTIYDFYGFPKQMYQLKYPAPGAPQLARRVKELLRKSGFNRVDEDTSRGLDHGAWVPLLLMYPEADIPVCQLSVQSNKDGTYHYNLGKALAPLKDEGVLIMGSGSAVHNLRTINPNSTVDPWALEFDNWLKDALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAVGAAGENAKAKLIHSSIEYGSLSYASYQFTSVADS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03019 267 SUPERFAMILY LigB-like 6 261 - -
Spst4g03019 267 PIRSF Doxgns_DODA 1 263 IPR014436 GO:0008270|GO:0016701
Spst4g03019 267 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 261 IPR004183 GO:0006725|GO:0008198|GO:0016491
Spst4g03019 267 Gene3D - 2 262 - -
Spst4g03019 267 PANTHER UNCHARACTERIZED 4 263 - -
Spst4g03019 267 CDD 45_DOPA_Dioxygenase 6 261 IPR014436 GO:0008270|GO:0016701
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03019 Spst-Chr4 69656476 69658290 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03019 K15777 - gmx:100798236 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03019 4 69656476 69658290 Spst4g03019 4 69656476 69658290 ECH