LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst4g02950	ATGCTTTCAAAACTCAACTCCCTTTTGGATAATTTAATCTTTTCTGGTTCTAATTTGGAGAAACCCAAGTTGAGGTTTCTCCTTTCCTGCACATATCCATTGTGTAATCAAGAAGCTGCATTCGAAGATTGCGAAAACGAGGCGAGGAAGATGCATTGTGCCCCTCAAGAGATAGGTAATGATAGTCCAAACGTTTCAGAAGCAAGAAAGGATTCCATATCAACAATATATCAACAACAAAATAGATTCACATCTTTAGAGGGTTGTCAAGAATCTTCTCTTTCAAGGACTAACTCTGATAGCAGGTGTGCCATCATTTCATTCCTTAACTTTGAGCCTGATGGAACCTGGAGAATTGTTGCCCTACCAGTGCAGTGTCTCAATCACATTAACTTAGCTTCTGGTGTAAATATGGATGGTGTGCAACTGCTTTTCCCTCCACCCCTTAATAGGTTGAAGATTGATCAATGTAAGGGCCCTAGAGTGCCTCTTCCTACATATGCTTATTCAGCTAAATCAGGTACAAAAAAAGGCTTTACTAGTTCAGCTGTGCGTCGACGATGTCAAAACAAGATTGCTAACAGAGCTTCTAAACTGAATGAACTCCCTGACAATTCAAGCTCTCAAAGTTCATTAGTCTGCAGCTCTGATTTGTTCCCTGATAATTCTGAGGAAATTAATTCATCTGATAAGTACACAATTAATTCCAAGGAGGAGGACAAGTCTTTGAAAAAAAACTCAAAAAAAAGGGCAAGAAAGAAAGTAAGACGGAGTAAGAAGAAATCAAGTGACAGTGGCTCTACTGAGCGCGAAGTTCTTACTGAGGAATATGTCTGTGTAAGTTTGACTTCTGAAACCTGCAGCAGCAATGACGTGGATAAGGAGGGTGTGGCAGAATTTTCAATATCTGATGATATATTAATAAAATCTGATTGTGATAGAAATGAGCTGAATGACAACATCATTGTTATGGAAGCACCTAATAATAGTAACTCTTATCTTGATCAGGCAGTGATGTCAAAAGATTCTGCACTTATTGTTCCAAGTTCTGCAGAAGAATGTGTCACATTTGACTCCAAGAATCAGCTCAAAGACAGGGACCCTGATTTTGCAGTCATTGATAGAGAAATAAAGGACATTCCACACGCTCAGCCATGCAGTTTTAATGATATACAAGACTCTTTTGTGCTGGATTCAGTTTCAGTTGGTTCCAGAAGTGATGAAAGTGTAAATGCAGATGATATAGGAAAACAGTCCAACAAGGCAAATTGCACAACCACTTCAGATTCAGGAGATGGATATTTCCTTGGTCAAAACTTGACTAATGGTATTCACAATAACTGTGAACATATTGAGGGAATCAGGCACGGTGGTCAAAATTGCATCAATAATGATAAGAGAGTTAAGCAGAAGAGAGCAATGTCGAACAGTGCAGCTTTAAACAAATTTGGAGCTGTTGGAATTTTGCATGGTCGTAAAGGGAAGGAAAACAGTCATTCTGTGTGGCAAAAGGTTCAGAAGAATAGTTCTGATGAATGTGGCAGTGATTTGAAGAAAGTAAACACTACTTTGTCCCAACTTGCTTCTACTGTGGAAAAGGATCCTTCAATTATCAAAGAATGTAATTCTGTTGGTGTAAATGGTGTGACAAAAACTGAGGATAAAAAACACATGAAAAATAAAATGGGTAAGAAATCAAAAGGTAAAATGGACTCGCTGTCAAAAAAGGGACACAGCAATTATTCTAAGAAGGGTTTGCATTTTAACAGGTCTTTTTCGAATGATCATGGGAAGGTTGGTGTTCAACAGAGTGATATGTTGCGTATCTCATCTCAGGAAATTGATCAACAAGGATTGAACAATGACTCTGAATTTAATTCTGATGTTAATTGCCTGATGGATGGGGTCCAGACCGATGGAGTTGAACAGGTAACGTCTGAAATGGTTCACAGAGCAGAATTTCATCTGGAGGAGTCAGATCCACAAAAAAATGCCTTCCATACAGGCGCAAACGCAAACAAGGAAAATATAGATAGTCAGGATAGCTCATTAGTAATGCCAATTGAGAACGTTAATCAATCAAGTATGTCCATAGAGTTGTCTGCAGTGTCTTGCAATCTTGAAGGTGATGAGATTGGTCAAACAGAGAAAGAAGTTTCTGCTGCAGACTACAACGCACAAAACCACGGCTCTGGAATTACGCTATGGAAATGGATACCAGTTGGGAAAAAGGATACAGGGTTGGAAAAATCTGAATCTAATATTTCACCGCCAGATTTCTCTGATGCATCCTCTAGTAACAATTTTAACTATGAAAGCAGTGTTGAACCAGAAGTGTCCCCTTCTGAAAATAAGGATTCTTCACTAAATACAAGCAGAATATCAAGCGACAATGTGTCCTGTCTAGATGAGGGCGAGGGTGAGAACCATAAATTGGGTGGTCAGGTTGCATGTACGTTGACACAGCACAGGGACAAGCATGAAGTTTCTAACCACATGTTTTATGAAAGCAAAAATCAAGACATGTTAGAAAAATATTCTTACAGAATATCTAAAGCTGTGAATGATGCATGTAGGGCGCAACTAGCTTGTGAAGCACTGCATATGGCTACAGGTGGTCCAGTTGCAGAGTTTGAAAGACTACTACATTTGGGTAGTCCTGTTATTTGTAAATCAGTCAATTCAGTCAGTTGTGCCACCTGCTCACACAACCATACTGGTAGTGTCTCACTGTGTAGACATGAGATCCCTAACCTATCTTTAGGATGCCTGTGGCAGTGGTATGAGAAACATGGGAGCTATGGATTAGAGATAAGGGCTCAGGATCATGAAATTCCAAAGAGACAAGGAGGTGTTAGTGATTTTCCATTCCGTGCCTACTTTGTCCCTTCTTTATCAGCCGTTCAGCTGTTTAAGAACCATGAAAATCAATGGGTAAATAGCGGTGACAAGGTTTCAAATTGTGAGGTTTCAGAGGCATGCGAAATGATTGATATTTCAGAAAACTCATCTATTGCCAGTCAACATTCAATATTTTCTGTTCTCTTTCCTCAGCCTCGCAATCCGGATGCAATCACTGAAACACCAAAGGAGATGGCTTCCATCAGTAATACATCTATTCCGTCTTACAACTCAAAGGGCTCTGGTGATTTTGAACTTCTTTTTGAATATTTTGAATTTGAGCAACCTCAACAAAGACAGCCTCTGTATGAGAAGATACAAGAACTGGTTAGAGGAAATATACCAATCCAATCTTCAACTTATGGGGACCCAACAAAACTGGATTCAATAAACCTGCGAGATCTTCACCCTAGATCTTGGTTCTCAGTTGCATGGTATCCTATTTACCGCATACCAGATGGCAACTTTCGGGCATCTTTTTTGACTTACCATTCACTTGGACATTTGGTTCGTAGAAGAACGGGTTCAGATTTGTCAACATTAAGTTCTTGCATAGTATCCCCAGCTGTGGGTCTTCAAAGCTACAATGCTCAGGGTGAATGCTGGTTTAAGCTGAAGCATTCTGCACTGGCAGCACAAATGGTGGGCTTAGACTCTTCTTTAGTTCTCAGAGAACGTTTGAAGACACTGGAGGAAACAGCATCTCTGATGGCAAGAGCTGTGGTCAACAAGGGGAACCTAACAAGTACAAACAAACACCCCGATTATGAGTTTTTCTTGTCTAGGCGACGGTATTGA	3699	0.399	MLSKLNSLLDNLIFSGSNLEKPKLRFLLSCTYPLCNQEAAFEDCENEARKMHCAPQEIGNDSPNVSEARKDSISTIYQQQNRFTSLEGCQESSLSRTNSDSRCAIISFLNFEPDGTWRIVALPVQCLNHINLASGVNMDGVQLLFPPPLNRLKIDQCKGPRVPLPTYAYSAKSGTKKGFTSSAVRRRCQNKIANRASKLNELPDNSSSQSSLVCSSDLFPDNSEEINSSDKYTINSKEEDKSLKKNSKKRARKKVRRSKKKSSDSGSTEREVLTEEYVCVSLTSETCSSNDVDKEGVAEFSISDDILIKSDCDRNELNDNIIVMEAPNNSNSYLDQAVMSKDSALIVPSSAEECVTFDSKNQLKDRDPDFAVIDREIKDIPHAQPCSFNDIQDSFVLDSVSVGSRSDESVNADDIGKQSNKANCTTTSDSGDGYFLGQNLTNGIHNNCEHIEGIRHGGQNCINNDKRVKQKRAMSNSAALNKFGAVGILHGRKGKENSHSVWQKVQKNSSDECGSDLKKVNTTLSQLASTVEKDPSIIKECNSVGVNGVTKTEDKKHMKNKMGKKSKGKMDSLSKKGHSNYSKKGLHFNRSFSNDHGKVGVQQSDMLRISSQEIDQQGLNNDSEFNSDVNCLMDGVQTDGVEQVTSEMVHRAEFHLEESDPQKNAFHTGANANKENIDSQDSSLVMPIENVNQSSMSIELSAVSCNLEGDEIGQTEKEVSAADYNAQNHGSGITLWKWIPVGKKDTGLEKSESNISPPDFSDASSSNNFNYESSVEPEVSPSENKDSSLNTSRISSDNVSCLDEGEGENHKLGGQVACTLTQHRDKHEVSNHMFYESKNQDMLEKYSYRISKAVNDACRAQLACEALHMATGGPVAEFERLLHLGSPVICKSVNSVSCATCSHNHTGSVSLCRHEIPNLSLGCLWQWYEKHGSYGLEIRAQDHEIPKRQGGVSDFPFRAYFVPSLSAVQLFKNHENQWVNSGDKVSNCEVSEACEMIDISENSSIASQHSIFSVLFPQPRNPDAITETPKEMASISNTSIPSYNSKGSGDFELLFEYFEFEQPQQRQPLYEKIQELVRGNIPIQSSTYGDPTKLDSINLRDLHPRSWFSVAWYPIYRIPDGNFRASFLTYHSLGHLVRRRTGSDLSTLSSCIVSPAVGLQSYNAQGECWFKLKHSALAAQMVGLDSSLVLRERLKTLEETASLMARAVVNKGNLTSTNKHPDYEFFLSRRRY	1232

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst4g02950	1232	PANTHER	PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC	59	1231	-	-
	Spst4g02950	1232	MobiDBLite	consensus disorder prediction	664	681	-	-
	Spst4g02950	1232	MobiDBLite	consensus disorder prediction	246	260	-	-
	Spst4g02950	1232	MobiDBLite	consensus disorder prediction	751	799	-	-
	Spst4g02950	1232	MobiDBLite	consensus disorder prediction	554	596	-	-
	Spst4g02950	1232	Pfam	Protein of unknown function (DUF789)	876	1226	IPR008507	-
	Spst4g02950	1232	MobiDBLite	consensus disorder prediction	195	268	-	-
	Spst4g02950	1232	MobiDBLite	consensus disorder prediction	195	230	-	-
	Spst4g02950	1232	MobiDBLite	consensus disorder prediction	661	681	-	-
	Spst4g02950	1232	MobiDBLite	consensus disorder prediction	231	245	-	-
	Spst4g02950	1232	MobiDBLite	consensus disorder prediction	554	578	-	-
	Spst4g02950	1232	MobiDBLite	consensus disorder prediction	747	808	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst4g02950	-		-	gmx:100798960	1671.37

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst4g02950	4	69122475	69129577	Spst4g02950	4	69122475	69129577	ECH