Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02896 ATGGAAGCAAGAAGAATCCCAGAAGTGATGCTAAACTCAGGGCAAAAGATGCCAGTGATAGGCCTTGGAACCGCATCAATTCCTCGTCCACCAGATGAAACTCTCACCTCCATATTTATTGATGCCTTTGAGGTTGGCTACAGACACTTTGATACTGCTGCATTGTATGGAAGTGAGGAGCCTCTAGGCAAAGCTGTGGAAAAGGCTTTGGAGCTAGGCCTTGTAAAGAGTAGAGATGAAGTATTCATCACTTCAAAACTATGGACAAGTGATGCTCACCCTGACCTTGTTGTCCCAGCTCTCAAGACCTCACTGCAGAAGTTGGGGTTGGAGTATGTAGATCTCTATTTGATTCATTGGCCTGTGAGGCTGAAACCTGAAGCCAAAGGGCCTGCTGATATATTAAAGGAGAATGTGATGCCCTCCTTTGACATGAAAGGAATATGGGAAGCTATGGAAGAGTGTTACAGATTGGGGTTAGTAAAGTCTATTGGTGTCAGCAACTTTGGCATCAAAAAGCTCAGCCAGCTCTTGGAAAATGCTACCATCCCTCCTGCTGTCAATCAGGTAGAAATGAGTCCATCATGGCAGCAGGGGAAACTCACAGAATTTTGCAAGCAGAAAGGAATTCATGTGAGTGCATGGTCACCACTGGGATCTTACAAAAGTTTTTGTGGTACAAATGCAGTAATGGAGAGCCCAATCCTTAAGGAAATCGCTTGTGCAAGACAGAAGAGCATGGCTCAGATTGCACTAAGATGGGTCTACGAGCAAGGAGCAAGTGTGATTGTGAGAAGCTTCAACAAGGAGAGAATGAAAGAAAACCTTGACATATTTGAGTGGGAACTGAGGCAGGAGGACACACAGAAATTCAGCCACATTCCACAGCATAGGATGTATAATGGAATAAGCTTTGTGTCAGAAAATGGACCTTACAAGACCTTGGAAGAGCTTTGGGATGGTGACGCTTGA 972 0.4475 MEARRIPEVMLNSGQKMPVIGLGTASIPRPPDETLTSIFIDAFEVGYRHFDTAALYGSEEPLGKAVEKALELGLVKSRDEVFITSKLWTSDAHPDLVVPALKTSLQKLGLEYVDLYLIHWPVRLKPEAKGPADILKENVMPSFDMKGIWEAMEECYRLGLVKSIGVSNFGIKKLSQLLENATIPPAVNQVEMSPSWQQGKLTEFCKQKGIHVSAWSPLGSYKSFCGTNAVMESPILKEIACARQKSMAQIALRWVYEQGASVIVRSFNKERMKENLDIFEWELRQEDTQKFSHIPQHRMYNGISFVSENGPYKTLEELWDGDA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02896 323 FunFam NAD(P)-linked oxidoreductase superfamily protein 7 310 - -
Spst4g02896 323 ProSitePatterns Aldo/keto reductase family putative active site signature. 263 278 IPR018170 GO:0016491
Spst4g02896 323 Pfam Aldo/keto reductase family 20 290 IPR023210 -
Spst4g02896 323 PRINTS Aldo-keto reductase signature 152 169 IPR020471 GO:0016491
Spst4g02896 323 PRINTS Aldo-keto reductase signature 42 66 IPR020471 GO:0016491
Spst4g02896 323 PRINTS Aldo-keto reductase signature 230 254 IPR020471 GO:0016491
Spst4g02896 323 PRINTS Aldo-keto reductase signature 103 121 IPR020471 GO:0016491
Spst4g02896 323 PRINTS Aldo-keto reductase signature 186 215 IPR020471 GO:0016491
Spst4g02896 323 PANTHER ALDO/KETO REDUCTASE 9 296 - -
Spst4g02896 323 CDD AKR_AKR4A_4B 13 296 IPR044497 GO:0016616
Spst4g02896 323 PIRSF AKR 3 318 IPR020471 GO:0016491
Spst4g02896 323 Coils Coil 269 289 - -
Spst4g02896 323 ProSitePatterns Aldo/keto reductase family signature 1. 46 63 IPR018170 GO:0016491
Spst4g02896 323 SUPERFAMILY NAD(P)-linked oxidoreductase 9 306 IPR036812 -
Spst4g02896 323 ProSitePatterns Aldo/keto reductase family signature 2. 152 169 IPR018170 GO:0016491
Spst4g02896 323 Gene3D - 2 317 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02896 Spst-Chr4 68630620 68632000 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02896 K22374 - gmx:100787305 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00815 1 10372032 10375010 Spst4g02896 4 68630620 68632000 PCT