Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02892 ATGTTCTATGATAACATTTTAACATTCATCACGTCAAACCCAACAGAAAATATGGAAGCAAAAAGAATCCCAGAAGTGATACTAAACTCAGGGCAAAAGATGCCAGTGATAGGCCTTGGAACCGCATCAATTCCTCGTCCACCAGATGAAACTCTCACCTCCATATTTATTGATGCCTTTGAGGTTGGCTACAGACACTTTGATACTGCTGCATTGTATGGAAGTGAGGAGCCTCTAGGCAAAGCTGTGGAAAAGGCTTTGGAGCTAGGCCTTGTAAAGAGCAGAGATGAAGTATTCATCACTTCAAAACTATGGACAAGTGATGCTCACCCTGACCTTGTTGTCCCAGCTCTCAAGACCTCACTGCAGAAGTTGGGGTTGGATTATGTAGATCTCTATTTGATTCATTGGCCTGTGAGGCTGAAACCTGAAGCCAAAGTGCCTGCTGATATATTAAAGGAGAATGTGATGCCCTCCTTTGACATGAAAGGAATATGGGAAGCTATGGAAGAGTGTTACAGATTGGGGTTAGTAAAGTCTATTGGTGTCAGCAACTTTGGCATCAAAAAGCTCAGCCAGCTCTTGGAAAATGCTACCATCCCTCCTGCTGTCAATCAGGTGGAAATGAGCCCATCGTGGCTGCAGGGGAAACTCACAGAATTTTGCAAGCAGAAAGGAATTCATGTGAGTGCATGGTCACCACTGGGATCTTACAAAAGTTTTTTTGGTACAAATGCAGTAATAGATAGCCCAATCCTTAAGGAAATCGCTTATGCAAGACAGAAGAGCAAGGCTCAGATTGCACTAAGATGGGTCTACGAGCAAGGAGCAAGTGTGATTGTGAGAAGCTTCAACAAGGAGAGAATGAAAGAAAACCTTGACATATTTGAGTGGGAACTGAGGCACGAGGAATCACAGAAATTCAGCCACATTCCACAGCATAGGATGTATAGTGGAATAAGCTTTGTATCAGAAAATGGACCTTACAAGACCTTGGAAGAGCTTTGGGATGGTGACGCTTGA 1023 0.435 MFYDNILTFITSNPTENMEAKRIPEVILNSGQKMPVIGLGTASIPRPPDETLTSIFIDAFEVGYRHFDTAALYGSEEPLGKAVEKALELGLVKSRDEVFITSKLWTSDAHPDLVVPALKTSLQKLGLDYVDLYLIHWPVRLKPEAKVPADILKENVMPSFDMKGIWEAMEECYRLGLVKSIGVSNFGIKKLSQLLENATIPPAVNQVEMSPSWLQGKLTEFCKQKGIHVSAWSPLGSYKSFFGTNAVIDSPILKEIAYARQKSKAQIALRWVYEQGASVIVRSFNKERMKENLDIFEWELRHEESQKFSHIPQHRMYSGISFVSENGPYKTLEELWDGDA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02892 340 Coils Coil 286 306 - -
Spst4g02892 340 ProSitePatterns Aldo/keto reductase family signature 1. 63 80 IPR018170 GO:0016491
Spst4g02892 340 SUPERFAMILY NAD(P)-linked oxidoreductase 26 322 IPR036812 -
Spst4g02892 340 ProSitePatterns Aldo/keto reductase family signature 2. 169 186 IPR018170 GO:0016491
Spst4g02892 340 FunFam NAD(P)-linked oxidoreductase superfamily protein 24 327 - -
Spst4g02892 340 Pfam Aldo/keto reductase family 37 307 IPR023210 -
Spst4g02892 340 PRINTS Aldo-keto reductase signature 120 138 IPR020471 GO:0016491
Spst4g02892 340 PRINTS Aldo-keto reductase signature 59 83 IPR020471 GO:0016491
Spst4g02892 340 PRINTS Aldo-keto reductase signature 247 271 IPR020471 GO:0016491
Spst4g02892 340 PRINTS Aldo-keto reductase signature 169 186 IPR020471 GO:0016491
Spst4g02892 340 PRINTS Aldo-keto reductase signature 203 232 IPR020471 GO:0016491
Spst4g02892 340 PIRSF AKR 19 335 IPR020471 GO:0016491
Spst4g02892 340 CDD AKR_AKR4A_4B 30 313 IPR044497 GO:0016616
Spst4g02892 340 PANTHER ALDO/KETO REDUCTASE 27 313 - -
Spst4g02892 340 ProSitePatterns Aldo/keto reductase family putative active site signature. 280 295 IPR018170 GO:0016491
Spst4g02892 340 Gene3D - 25 340 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02892 Spst-Chr4 68606489 68607949 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02892 K22374 - gmx:100787305 551.977