Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02890 ATGAGATTTTTGTCACCACCAAACTGTGGTGCACTGAAGCTAATCCTGGCCTTGTGCTACCAGCACTCACGAGCTCATTACATGAGGCTGAGACAAGGAGCAAAAGGGACCAAGTATGGCAAAGAAGACATTCTTCCTTTGGACATGAAAGGGATATGGGAAGACATGGAACTATGCACCAAATTGGGTTTGGCCAAGTCCATTGGTGTAAGCAATTTTGGGGTGAAAAAGCTTTCAGAACTTATGCAAAATGCTATTATTACTCCTGCTCTTGTCCAGGTGGAGATGAACGCAGCATGGTCACAGGAAAATCTGAGAAAATTCTGCAAAGAAAAAGGAATTCACGTGAGTGCATGGTCTCCTCTAGGAGCCAATGGAGCTGTGTGGGGCTCCCTTGCTGTTATGGACAGTCCTATTCTAAAAGATATTGCAGTCAAAAAAGACAAGAGTGTGGCACAGGTTGCATTGAGGTGGATAATAGAGGAAGGTGCAACTCCAATAGTGAAGAGCTTCAACAGTGAGAGAATGAGGCAAAACATTGAAATATTTGATTGGGAGCTGAGTGAGAGTGATGCAGAGAAGATAAAGGAAATACCACAACACAGGGGTTTCAAAGGTGAACGTTTTGTCTCTGAATTTGGTCCTTTCAAAACCCTGGAAGATCTTTGGGAATGA 675 0.4356 MRFLSPPNCGALKLILALCYQHSRAHYMRLRQGAKGTKYGKEDILPLDMKGIWEDMELCTKLGLAKSIGVSNFGVKKLSELMQNAIITPALVQVEMNAAWSQENLRKFCKEKGIHVSAWSPLGANGAVWGSLAVMDSPILKDIAVKKDKSVAQVALRWIIEEGATPIVKSFNSERMRQNIEIFDWELSESDAEKIKEIPQHRGFKGERFVSEFGPFKTLEDLWE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02890 224 ProSitePatterns Aldo/keto reductase family putative active site signature. 167 182 IPR018170 GO:0016491
Spst4g02890 224 PRINTS Aldo-keto reductase signature 134 158 IPR020471 GO:0016491
Spst4g02890 224 PRINTS Aldo-keto reductase signature 90 119 IPR020471 GO:0016491
Spst4g02890 224 PRINTS Aldo-keto reductase signature 56 73 IPR020471 GO:0016491
Spst4g02890 224 PANTHER ALDO/KETO REDUCTASE 42 200 - -
Spst4g02890 224 ProSitePatterns Aldo/keto reductase family signature 2. 56 73 IPR018170 GO:0016491
Spst4g02890 224 Gene3D - 16 224 IPR036812 -
Spst4g02890 224 SUPERFAMILY NAD(P)-linked oxidoreductase 20 209 IPR036812 -
Spst4g02890 224 Pfam Aldo/keto reductase family 49 198 IPR023210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02890 Spst-Chr4 68585721 68587527 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02890 K22374 - gmx:100799650 347.051