Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02888 ATGGAGGCAAAGGCAATACCAGAAGTGGTACTAAACTCAGGGCAGAAGATGCCAAGATTAGGTTTTGGCACAGGAACAGTGCCATTACCACCACCTCATGTCCTCATCCCTGCATTCATTGAAGCCATCAAAGTTGGCTACAGGCATTTTGACACTGCAGCTTATTATGGCTCTGAGGAACCTCTTGGCCAAGCCATAACACAAGCCCTAGATCAAGGTCTCATTCAAAGCCGTAATGAGCTTTTTGTCACCACCAAACTGTGGTGCACTGAAGCTAATCCTGGTCTTGTGCTACCAGCACTCAAGAGTTCATTACAGAGGTTGGGGCTAGAGTATGTGGATCTTTATCTAATCCATTTTCCTGTGAGGCTGAGACAAGGAGCCAAAGGAACCAAGTATGGCAAAGAAGACATTCTTCCTTTGAACATGAAAGGGACATGGGAAGACATGGAACTATGCTCCAAAATGGGTTTGGCCAAGTCCATTGGTGTAAGCAATTTTGGGGTGAAAAAGCTTTCAGAACTTATGCAAAATGTTATTGTTACTCCTGCTCTTGTCCAGGTGGAGATGAACGCAGCATGGTCACAGGAAAATCTGAGAAAATTCTGCAAAGAAGAAGGAATTCACGTGAGTGCATGGTCTCCTCTGGGAGCCAATGGAGCTGTGTGGGGCTCCCTTGCTGTTATGGACAGTCCTATTCTAAAAGATATTGCAGTCAAAAAAGGCAAGAGTGTGGCACAGGTTGCATTGAGGTGGATAATAGAGGAAGGTGCAACTCCAATAGTGAAGAGCTTCAACAGTGAGAGAATGAGGCAAAACATTGAAATATTTGATTGGGAGCTGAGTGAGAGTGATGCAGAGAAGATAAAGGAAATACCACAACACAGGGGTTTCAAAGGTGACCGTTTTGTCTCTGAATTTGGTCCTTTCAAAACTATAGAAGATCTTTGGGAATGA 957 0.4431 MEAKAIPEVVLNSGQKMPRLGFGTGTVPLPPPHVLIPAFIEAIKVGYRHFDTAAYYGSEEPLGQAITQALDQGLIQSRNELFVTTKLWCTEANPGLVLPALKSSLQRLGLEYVDLYLIHFPVRLRQGAKGTKYGKEDILPLNMKGTWEDMELCSKMGLAKSIGVSNFGVKKLSELMQNVIVTPALVQVEMNAAWSQENLRKFCKEEGIHVSAWSPLGANGAVWGSLAVMDSPILKDIAVKKGKSVAQVALRWIIEEGATPIVKSFNSERMRQNIEIFDWELSESDAEKIKEIPQHRGFKGDRFVSEFGPFKTIEDLWE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02888 318 Pfam Aldo/keto reductase family 20 292 IPR023210 -
Spst4g02888 318 ProSitePatterns Aldo/keto reductase family putative active site signature. 261 276 IPR018170 GO:0016491
Spst4g02888 318 PRINTS Aldo-keto reductase signature 103 121 IPR020471 GO:0016491
Spst4g02888 318 PRINTS Aldo-keto reductase signature 150 167 IPR020471 GO:0016491
Spst4g02888 318 PRINTS Aldo-keto reductase signature 184 213 IPR020471 GO:0016491
Spst4g02888 318 PRINTS Aldo-keto reductase signature 228 252 IPR020471 GO:0016491
Spst4g02888 318 PRINTS Aldo-keto reductase signature 42 66 IPR020471 GO:0016491
Spst4g02888 318 CDD AKR_AKR4A_4B 13 294 IPR044497 GO:0016616
Spst4g02888 318 SUPERFAMILY NAD(P)-linked oxidoreductase 9 305 IPR036812 -
Spst4g02888 318 PANTHER ALDO/KETO REDUCTASE 9 294 - -
Spst4g02888 318 ProSitePatterns Aldo/keto reductase family signature 2. 150 167 IPR018170 GO:0016491
Spst4g02888 318 Gene3D - 6 318 IPR036812 -
Spst4g02888 318 FunFam NADPH-dependent codeinone reductase 1-1 6 318 - -
Spst4g02888 318 ProSitePatterns Aldo/keto reductase family signature 1. 46 63 IPR018170 GO:0016491
Spst4g02888 318 PIRSF AKR 2 315 IPR020471 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02888 Spst-Chr4 68581192 68583115 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02888 K22374 - gmx:100799650 562.377