Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02886 ATGCCCATGCTTGGCTTTGGCACTGCAGCTATACCCCTCCCACCAAATGATGAACTCATCCCAGTGTTCATTGCTGCCATTGAAGCTGGCTACCGCCATTTCGACACTGCTACTCTGTATGGTTCTGAGGAGGCCCTTGGTCTAGCTCTGGCACAAGCACAACGCCAAGGTCTTATTAAGAATCGTCGTGACATTTTTGTCACAACCAAGCTATGGTGTTCTGATGCTCATCCTGACCTTGTCCTCCCAGCACTCAAGAAATCACTGCAGAGGTTGGGACTTGAGTACGTGGATCTTTACCTAATCCATTATCCAGTGAGGTTGAGACAGGGAGTTGCAGGAAACATTTCCAAAGGGGATGTGCTTCCTTTTGACATAAAAGGGACATGGAAAGCCATGGAAGACTGCTCTAAATTAGGCTTAACCAAGTCTATTGGTGTCAGCAATTTTGGAGCAAGAAAGCTTTCAGAACTTCTGCAGAATGTAACTATTACCCCTGCTGTTAATCAGGTACACATCTTCCCGGTTATGTATGAGTGA 540 0.463 MPMLGFGTAAIPLPPNDELIPVFIAAIEAGYRHFDTATLYGSEEALGLALAQAQRQGLIKNRRDIFVTTKLWCSDAHPDLVLPALKKSLQRLGLEYVDLYLIHYPVRLRQGVAGNISKGDVLPFDIKGTWKAMEDCSKLGLTKSIGVSNFGARKLSELLQNVTITPAVNQVHIFPVMYE 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02886 179 ProSitePatterns Aldo/keto reductase family signature 2. 133 150 IPR018170 GO:0016491
Spst4g02886 179 ProSitePatterns Aldo/keto reductase family signature 1. 30 47 IPR018170 GO:0016491
Spst4g02886 179 PRINTS Aldo-keto reductase signature 87 105 IPR020471 GO:0016491
Spst4g02886 179 PRINTS Aldo-keto reductase signature 26 50 IPR020471 GO:0016491
Spst4g02886 179 PRINTS Aldo-keto reductase signature 167 179 IPR020471 GO:0016491
Spst4g02886 179 PRINTS Aldo-keto reductase signature 133 150 IPR020471 GO:0016491
Spst4g02886 179 PANTHER ALDO/KETO REDUCTASE 1 177 - -
Spst4g02886 179 Gene3D - 1 179 IPR036812 -
Spst4g02886 179 Pfam Aldo/keto reductase family 4 174 IPR023210 -
Spst4g02886 179 SUPERFAMILY NAD(P)-linked oxidoreductase 1 176 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02886 Spst-Chr4 68576652 68577409 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02886 K22374 K19651 gmx:100799650 239.195