Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02837 ATGCTATTTCCCAATTTCATCTTTTCTGATTCAATTAACTTCGATCCACAGTTTACCTATCTATTTATTGATTTTTATTCGCGCCTCTTTCTAGTGTGCAGTGTGCTGAACTCAATCGGAAGGTTCTCCGCAATGACACCTCGGAAGGCGATTGGTTTCATTGGCGTCGATGAGTTCACCTTGGAGATGGCGTATTCGGCTATTCACCATGGCTACGGTGTGCAAGCTTTCGAGATAAATAGTCCCGCCATTGAAGAACTCGTGAAGCTTGGAGGAGTTAGATGTTCAAGCCCTTCGGAAGCCGGGGCAGATGTAACAGCTGTAGTTATCCTAATATCTCACATAGATCAAACTAATGATCTCATTTTTGGTGATGAGGGTGCTTTGAAAGGTCTAAAATCAGAAACAGTTCTTATTCTCCGGTCGACCATATTACCATCATTTCTCTGTAAACTGGAGAAGGATCTTTCAGAAATTCATGAGATTGCTTATGTTGTTGATGCATATGTCTCTTATGGGAGATCCGATGCTTTGAATGGAAAAGTTACAATTGCTTCATCTGGAAGACTAGATGCCATTGCTAGAGCACGGCCTATTCTTTCTGCAATGTGTGAAAAGATCTTCACTTTTGAGGGTGAAATTGGTGGTGGCAGCAAGGTTAACATGGTTAATGTGATGCTGGAAGGCATTCATTTTATTAATGCAGTGGAGGCTCTCTCTCTTGGTGCCAAAATTGGAATTCATCCTTGGATAATCTATGATATAATTTCCAATGCTGCAGGAAATTCATGGGCGTTCAAGAATTATGTTCCCCTTTTGTTGAAGGGAGAGGTTAATCATCAAATTCTAAACACTTTTGTTAAGGAGTTGGAAATCATTTTGAATATGGCCAAGTCACTTACCTTTCCGCTTCCAATTTTGGCTGCTACTCATCTACAACTTATTCACGGGCTTTCGCTTGCCGATAGTGGAGATGATGTTACAGTTTGGGAAAAGGTTTATGGGGTTAAAATTTCAGATGCTGCAAATGCTCATGCCTATAACCCAGAGGAACTGGCATCTGAATTTACTACTGATTCTAAGAGTGTGAGAAGGATTGGTTTTATCGGCCTTGGAGCTATGGGATTTGGCATGGCAACTCATTTACTGAGTTCAAAATTCTGCGTTGTTGGTTATGATGTGTTTAAACCAACTCTAACTCGATTTACAAATGCTGGTGGCCTAATAGGAAATTCTCCTGCTGAAGTGAGCAAAGATGCTGATGTTCTCATAATTATGGTCACTAATGAAGCTCAAGCAGAAAATGTTTTGTATGGAGAAAATGGAGCAGTTTCAGTTCTTCCATCAGGAGCATCAATTATTCTCTCTTCCACTGTTTCCCCTGCATATGTGAGTCAGCTAGAGCGCAGATTGCATAGTATGTTACTCAACCACAATAGGAAGCCTCATGCCCCAACTTGTAATAAACTTGACATTGAATATTGGAGGTTCCACAATCATGTCCACATCGACCTCCACGGCCAAAACCAGCAAAATTACAACGATTACCACCACAATTACCACAGCCAGTATCAAAGTTTTCAGCTGATGGTTGAGAACATGAATTCACGTAGTGATAGGAACAGATTCGACAGATATAGCTTGAGTAGGAGTCAAGATGAAGGTAAGAATTTGAAGTTGGTGGATGCCCCGGTTTCTGGTGGTGTTCAGAGGGCCTCATTGGGAACACTTACGATAATGGCTTCAGGAACTGATGACGCCCTTAAGAGTGCTGGTCAAGTCTTAGCAGCCTTGAGTGAGAAGCTTTATATTATCAAAGGTGGTTGTGGTTCTGGAAGTGGCATAAAGATGATTAACCAATTGCTTGCTGGAGTTCAGATTGCCTCGGCTGCTGAGGCAATAGCATTTGCAGCTCGGTTGGGTTTGAATACAAGACTGTTGTTTGATTTTATTACAACTAGCGGGGGAACTTCCTGGATGTTTGAGAATCGTGGCCAACACATGATAGACAACGATTACACACCTTGTTCAGCACTTGATATCTTTGTGAAGGACTTGGGAATTGTTACTCGTGAATCATCTACGTGGAAAGTTCCACTTCAGCTATCAACTATTGCTCACCAACTATATCTGGCAGGTTCTGCTGCAGGCTGGGGACGGATTGATGATGCAGGTGTGGTCAAGGTTTATGAGATGCTTACTGGTGTAAGAGTTGAAGGAAAACTCCAGGCTCAAAGGAAAGATGTCGTGTTACATTCTCTTCCACCAGAGTGGCCCCAAGATCATGTTCTTGATATACAAACACTAAAAGAAAACAATTCAAAGGTTTTAGTTGTTTTGGATGATGATCCGACAGGAACACAAACTGTTCATGATATTGAGGAAGCAGATGCTGTTGTTTCAGTGTTAGGTGAAATGGATGCATGGATAATCTGTCCCTTTTTCCTTCAAGGAGGTCGTTACACTATTGAAGACACACACTATGTTGATGATTCTGATACGCTTGTTCCTGCAGGGGACACAGAGTTTGCCAAAGATGCTTCCTTTGGCTACAAATCTTCAAACCTGCGTGATTGGTTAGAGGAGAAGACAAATGGCCGAATACTTGCAAGTAGTGTTGCATCTGTTTCTATCCAACTTTTAAGGAAAGGTGGTCCAAATGCAGTTTGTCAGCATCTATGCAGTTTGCAGAAGCAGGGAACAATATGCATAGTTAATGCAGCTAGTGAAAGAGACATGACTGTATTTGCACTTGGAATGATCAAGGCAAAACTTCCTTCTCTTTCATGCTTTTTTGCAGAATTGACGGGAAGACGTTTCTTGTGTCGAACTGCAGCTAGTTTTGTCTCTGCCCTTATGGGAATCATCTCTAAGCCTCCAATTTTGCCAAGTGATCTAGGAATAGCTGGAGAAAGGAATGGTGGTTTGATAGTTGTGGGATCCTACGTTCCTAAAACAACAAAGCAGGTGGAAGAATTAAAACTACAGTGTGGCCAGTTCTTAAAAAGCATTGAGGTATCAGTTGAAAAACTTGCAATGAGTCCTATTGAGGAGAGGGAGGAGGAAATCAGTAGAACGGCTGAATTAGCAGATGTATATCTCAAAGCTCATAAAGACACTCTAATAATGACCAGCCGAAATCTCATAACTGGAAGAACTGCGGCTGAAAGTTTGGACATTAACTTTAAAGTGAGTTCCGCTTTGGTGGAAATAGTGAAAAGAGTAACTACAAAACCTCGCTATATAATTGCAAAGGGTGGTATTACGTCTTCAGACCTCGCTACAAAAGCCCTTGGTGCAAGATGTGCGAAGATAGTTGGACAAGCACTTGCTGGTATTCCCTTGTGGCAATTAGGCCCTGAAAGTAGACATCCTGGAATTCCTTATATTGTCTTCCCTGGTAATGTTGGTAACAGCACAGCATTGGCAGAAGTTGTGAAGTCCTGGACTCACCCAATCAGATTTACATCAACAAAAGAAATTCTTAATAATGCAGAAAAGGGTGGTTATGCTGTTGGAGCATTTAATGTCTACAATTTGGAAGGAGTTGAGGCTGTTGTTTCGGCTGCAGAGGAAGAACAGAGTCCTGCTATATTACAGAAAAACGAGGGGAAAAGAAAGATACATCCAGGTGCCTTTAAGCAAGGAGGAATTCCCTTGGTTGCTTGTTGCATTTCTGCCGCACAACAAGCCAGTGTTCCCATTACTGTTCACTTTGATCATGGAACTTCAAAGCAAGATCTTGTCGAAGCTCTTGACCTGGGATTCAGTTCTGTTATGGTTGATGGTTCACATCTTTCTTTCAATGAAAATGCTGCATACACAAAATTTATAACATTACTGGCGCACTCAAAAAATATGCTGGTTGAAGCTGAGCTAGGAAGATTGTCAGGGACAGAGGATGATTTGACAGTAGAAGAATTTGAAGCCAGACTAACAGATGTGAATATGGCATCAAAATTCATAGATGAGACTGGAATAGATGCTTTGGCAGTGTGTATCGGAAATGTGCATGGAAAGTACCCTGCAAGTGGTCCAAATCTCAGAGTTGATTTGCTTAAGGAGCTGCATTCTTTGAGCCTTAAGAAAGGAGTTTATCTGGTGCTTCATGGTGCGTCTGGTTTGAGCAAAGAACTTGTAAAGGAATGCATAAATCTTGGTGTTAGAAAGTTCAATGTCAACACTGAAGTAAGAAAAGCGTACATGGACTCCCTCATTACCCCCAAGAACGATCTAGTTCATCTCATGGCTTCTGCAAAGGAAGCCATGAAAGCTGTGGTTGCAGAAAAGATGCATCTCTTTGGTTCAGCAGGAAAGGCATAA 4323 0.4166 MLFPNFIFSDSINFDPQFTYLFIDFYSRLFLVCSVLNSIGRFSAMTPRKAIGFIGVDEFTLEMAYSAIHHGYGVQAFEINSPAIEELVKLGGVRCSSPSEAGADVTAVVILISHIDQTNDLIFGDEGALKGLKSETVLILRSTILPSFLCKLEKDLSEIHEIAYVVDAYVSYGRSDALNGKVTIASSGRLDAIARARPILSAMCEKIFTFEGEIGGGSKVNMVNVMLEGIHFINAVEALSLGAKIGIHPWIIYDIISNAAGNSWAFKNYVPLLLKGEVNHQILNTFVKELEIILNMAKSLTFPLPILAATHLQLIHGLSLADSGDDVTVWEKVYGVKISDAANAHAYNPEELASEFTTDSKSVRRIGFIGLGAMGFGMATHLLSSKFCVVGYDVFKPTLTRFTNAGGLIGNSPAEVSKDADVLIIMVTNEAQAENVLYGENGAVSVLPSGASIILSSTVSPAYVSQLERRLHSMLLNHNRKPHAPTCNKLDIEYWRFHNHVHIDLHGQNQQNYNDYHHNYHSQYQSFQLMVENMNSRSDRNRFDRYSLSRSQDEGKNLKLVDAPVSGGVQRASLGTLTIMASGTDDALKSAGQVLAALSEKLYIIKGGCGSGSGIKMINQLLAGVQIASAAEAIAFAARLGLNTRLLFDFITTSGGTSWMFENRGQHMIDNDYTPCSALDIFVKDLGIVTRESSTWKVPLQLSTIAHQLYLAGSAAGWGRIDDAGVVKVYEMLTGVRVEGKLQAQRKDVVLHSLPPEWPQDHVLDIQTLKENNSKVLVVLDDDPTGTQTVHDIEEADAVVSVLGEMDAWIICPFFLQGGRYTIEDTHYVDDSDTLVPAGDTEFAKDASFGYKSSNLRDWLEEKTNGRILASSVASVSIQLLRKGGPNAVCQHLCSLQKQGTICIVNAASERDMTVFALGMIKAKLPSLSCFFAELTGRRFLCRTAASFVSALMGIISKPPILPSDLGIAGERNGGLIVVGSYVPKTTKQVEELKLQCGQFLKSIEVSVEKLAMSPIEEREEEISRTAELADVYLKAHKDTLIMTSRNLITGRTAAESLDINFKVSSALVEIVKRVTTKPRYIIAKGGITSSDLATKALGARCAKIVGQALAGIPLWQLGPESRHPGIPYIVFPGNVGNSTALAEVVKSWTHPIRFTSTKEILNNAEKGGYAVGAFNVYNLEGVEAVVSAAEEEQSPAILQKNEGKRKIHPGAFKQGGIPLVACCISAAQQASVPITVHFDHGTSKQDLVEALDLGFSSVMVDGSHLSFNENAAYTKFITLLAHSKNMLVEAELGRLSGTEDDLTVEEFEARLTDVNMASKFIDETGIDALAVCIGNVHGKYPASGPNLRVDLLKELHSLSLKKGVYLVLHGASGLSKELVKECINLGVRKFNVNTEVRKAYMDSLITPKNDLVHLMASAKEAMKAVVAEKMHLFGSAGKA 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02837 1440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 554 605 IPR036291 -
Spst4g02837 1440 Gene3D - 967 1148 IPR042213 -
Spst4g02837 1440 SUPERFAMILY YgbK-like 777 1146 - -
Spst4g02837 1440 Gene3D - 45 212 - -
Spst4g02837 1440 Gene3D - 215 336 IPR013328 GO:0016491
Spst4g02837 1440 Pfam Sugar-binding N-terminal domain 794 952 IPR010737 -
Spst4g02837 1440 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 368 381 IPR002204 GO:0016491
Spst4g02837 1440 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 610 730 IPR029154 GO:0051287
Spst4g02837 1440 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 215 312 IPR029154 GO:0051287
Spst4g02837 1440 Pfam Fructose-bisphosphate aldolase class-II 1157 1439 IPR000771 GO:0005975|GO:0008270|GO:0016832
Spst4g02837 1440 Gene3D - 607 738 IPR013328 GO:0016491
Spst4g02837 1440 PANTHER 3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED 48 337 - -
Spst4g02837 1440 Gene3D Aldolase class I 1149 1440 IPR013785 -
Spst4g02837 1440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 49 208 IPR036291 -
Spst4g02837 1440 CDD TBP_aldolase_IIB 1158 1438 IPR000771 GO:0005975|GO:0008270|GO:0016832
Spst4g02837 1440 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 609 731 IPR008927 -
Spst4g02837 1440 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 213 334 IPR008927 -
Spst4g02837 1440 NCBIfam ketose-bisphosphate aldolase 1155 1440 IPR000771 GO:0005975|GO:0008270|GO:0016832
Spst4g02837 1440 Gene3D - 791 947 IPR037051 -
Spst4g02837 1440 Gene3D - 358 606 - -
Spst4g02837 1440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 364 473 IPR036291 -
Spst4g02837 1440 Pfam Nucleotide-binding C-terminal domain 976 1142 IPR031475 -
Spst4g02837 1440 SUPERFAMILY Aldolase 1156 1440 - -
Spst4g02837 1440 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 51 209 IPR006115 GO:0050661
Spst4g02837 1440 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 365 473 IPR006115 GO:0050661
Spst4g02837 1440 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 554 603 IPR006115 GO:0050661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02837 - - csin:114268100 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02837 4 68067483 68102556 Spst4g02837 4 68067483 68102556 ECH