Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02836 ATGGCGGATCTGAGCCCCAAACCAGAGACCTTTGAGCTCAATAATGGCAGCATGAAGGTTCTTCTCACCAATCTTGGGTGCACCATTATCTCCTTATCAGTTCCCGGAAAAGATGGATTGTTATCCGACGTCGTTCTTGGCCTCGACTCTCTTGAATCCTATCAGAAAGGTCTTGCTCCTTATTTTGGCTCCATTGTGGGTCGGGTTGCGAACCGAATCAAGGATGGCAAGTTTACACTTGACGGGGTTCAGTATTCTTTGCCTCTGAACAAACCCCCAAACAGTCTCCATGGTGGAAATGTTGGGTTTGATAGGAAGGTATGGGAGGTGGTTGAACATAAAAAAGGCGAAACACCCTCAATCACTTTCAAATATCACAGTCAAGATGGAGAGGAAGGTTATCCTGGGGATATCACCGTTACTGCCACTTACACGCTCACCTCTGGCACAACTCTGAGGCTTGACATGGAAGGAGTGACAACGGACAAGCCCACCATAGTCAATTTAGCTCAGCATACCTACTGGAACTTAGCTGGTCACAACTCAGGGAATATACTTGACCATTCAATTCAGATATGGGCTAATCATGTCACTCCTGTGGACGAGAATACCGTGCCAACTGGTGAAATCATGCCAGTGAAGGATACCCCTTTTGATTTTACATCTGAGAATAGAATAGGCAGCACTATTAGTCAGGTTGGATTGGGATATGACCACAACTTTGTGCTTGATTGTGGGGAAGAGAAAGATGGTTTGAGGCATGCTGCAAAAGTGAGGGATCCATCAAGTTCAAGAGTACTGAACTTGTGGACAAGTGCCCCTGGTGTGCAATTTTACACTGCAAACTATGTTAATGGTGTTCAAGGAAAAGAAGGTGCCATATATGGAAAGCATGCAGGGTTATGTCTGGAGACACAAGGATTCCCTGATGCCATAAACCAGCCAAATTTTCCATCTGTTGTCGTTCGTCCAGGTGAGAAGTATCAGCATAGCATGTTGTTTGAGTTTTCAGTTGAATGA 1020 0.452 MADLSPKPETFELNNGSMKVLLTNLGCTIISLSVPGKDGLLSDVVLGLDSLESYQKGLAPYFGSIVGRVANRIKDGKFTLDGVQYSLPLNKPPNSLHGGNVGFDRKVWEVVEHKKGETPSITFKYHSQDGEEGYPGDITVTATYTLTSGTTLRLDMEGVTTDKPTIVNLAQHTYWNLAGHNSGNILDHSIQIWANHVTPVDENTVPTGEIMPVKDTPFDFTSENRIGSTISQVGLGYDHNFVLDCGEEKDGLRHAAKVRDPSSSRVLNLWTSAPGVQFYTANYVNGVQGKEGAIYGKHAGLCLETQGFPDAINQPNFPSVVVRPGEKYQHSMLFEFSVE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02836 339 PIRSF GALM 4 339 IPR015443 GO:0016853|GO:0019318
Spst4g02836 339 FunFam Aldose 1-epimerase 2 338 - -
Spst4g02836 339 CDD galactose_mutarotase_like 14 336 IPR047215 GO:0016853
Spst4g02836 339 PANTHER ALDOSE-1-EPIMERASE 9 338 - -
Spst4g02836 339 Gene3D - 5 339 IPR014718 GO:0030246
Spst4g02836 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
Spst4g02836 339 SUPERFAMILY Galactose mutarotase-like 10 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02836 Spst-Chr4 68063680 68065788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02836 4 337 Miscellaneous Gene Families AT3G47800 49.701 3.45e-107 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02836 K01785 - gmx:100809972 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02836 4 68063680 68065788 Spst4g02836 4 68063680 68065788 ECH