Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02835 ATGTCCGTGGAACTCAAGCTCTCTCGTCCCAATCGTATCTATCGCCCTTCGGAAACTCTGGAAGGCAAAATCGTTGTCAAAGCTCAGTCTTCAATTTCCCACTATGAAATTCGCCTCACTGTCAAAGGATCCGTCAACTTGCAGGTTCGTGGAGGATCAGCTGGGGTTGTTGAATCACTCTATGGCGTTATTAAGCCCATTCCAATTGTGAATAGGGTCATTGGGGTTAAATCTTCTGGAAAGATTGGTATGGGTACATCAGAGATACCATTCTCTTTGAATCTGCGGGATAAAAATTTAGAAAGATTTTATGAGACATTCCATGGTACAAATATAAGCATCCAGTATTTGGTGACTGTAGATATACCTCGTGGATACTTGCATAAATCATTATCAGCAACAATGGAGTTCATTGTTGAAAGTGATAAAGCTGATCTTCTACAAAGGCCACTTTCTCCAGAGATGGTAATCTTTTACATTACTCAAGACACTCAAAGGCATCCTCTACTTCCTGAAATAAAATCTGGTGGATTTTGGGTGACAGGAAAAATCTCCACTCAGTGTTCTTTGTCTGGTCCTATTAGTGGTGAGTTAACTGTAGAAGCATCTGCAGTTCCAATTCAGTCAATTGACATTCAGTTGTTTCGAGTTGAGTCCATTCTTCTTGGGGAGAAAATTGTGACTGAAACCTCTCTGATTCAAACAACACAGATAGCAGATGGAGATGTATGCCGACATTTGACACTGCCTATTTATGTAATACTACCACGTCTTGTGACCTGTCCAACAACCTTAGCGGGTCCCTTCTCAATAGAGTTCAAAGTTGCTATTGTTATAAGCTTTCAGTCAGAGCTAAGTAAATTGCATAAAAAATCGGACCCCAAAACTCCAAGACTCTGGCTGGCAATGGAAACATTACCACTTGAGTTGGTTAGGACAAAAACCATTGCATTGAAACAGTTCTTCGTCTCTGCATCCAAACTACTTTACTAA 993 0.4058 MSVELKLSRPNRIYRPSETLEGKIVVKAQSSISHYEIRLTVKGSVNLQVRGGSAGVVESLYGVIKPIPIVNRVIGVKSSGKIGMGTSEIPFSLNLRDKNLERFYETFHGTNISIQYLVTVDIPRGYLHKSLSATMEFIVESDKADLLQRPLSPEMVIFYITQDTQRHPLLPEIKSGGFWVTGKISTQCSLSGPISGELTVEASAVPIQSIDIQLFRVESILLGEKIVTETSLIQTTQIADGDVCRHLTLPIYVILPRLVTCPTTLAGPFSIEFKVAIVISFQSELSKLHKKSDPKTPRLWLAMETLPLELVRTKTIALKQFFVSASKLLY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02835 330 FunFam Vacuolar protein sorting-associated protein 26 181 288 - -
Spst4g02835 330 SUPERFAMILY E set domains 3 171 IPR014756 -
Spst4g02835 330 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 11 290 IPR028934 GO:0006886
Spst4g02835 330 Pfam Vacuolar protein sorting-associated protein 26 11 279 IPR028934 GO:0006886
Spst4g02835 330 Gene3D - 183 291 IPR014752 -
Spst4g02835 330 FunFam Down syndrome critical region protein 3 1 142 - -
Spst4g02835 330 Gene3D - 1 142 IPR014752 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02835 K25730 - gmx:100820593 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02835 4 68058153 68062207 Spst4g02835 4 68058153 68062207 ECH