Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02833 ATGAATTTTCTGGTTTCAAGGACCCATAGAATAGAAGACTTCACAAGCCACAAAATGATCACCTTAATAGACTTCTACCATGTCATGACTGCAATGGTGCCACTCTATGTGGCTATGATACTAGCCTATGGCTCAGTTAAGTGGTGGAAGATTTTCTCCCCTGATCAATGTTCTGGCATCAACCGTTTTGTGGCACTCTTTGCAGTGCCTCTTCTTTCCTTCCACTTCATAGCATCCAACAACCCTTACAAGATGAACCTTAGGTTCCTAGCTGCTGACACCCTTCAGAAGATCATAATACTAGTCCTTCTTGCAGTTTGGAGCAACTTCACCAAAAGGGGTTGCTTGGAGTGGACCATCACCTTGTTTTCCCTCTCCACCCTCCCAAACACTTTGGTCATGGGCATCCCTTTGCTCAAAGGGATGTACGGTGAGTTCTCAGGGAGCCTAATGGTGCAAATTGTGGTCCTCCAGTGCATCATTTGGTACACCTTGATGCTGTTCATGTTTGAGTTCAGGGGTGCCAGAATGCTAATCTCTGAGCAGTTCCCTGACACTGCTGGCTCCATTGTCTCCATCCATGTGGACTCTGATGTCATGTCATTGGATGGAAGGCAACCACTAGAGACTGAAGCTGAGATTAAAGAAGATGGGAAACTCCATGTCACAGTGAGGAAATCCAATGCCTCAAGATCAGACATATTCTCCAGAAGGTCTCAGGGTCTTTCTTCCACCACCCCACGCCCTTCTAACCTCACAAATGCAGAGATATACTCTTTGCAATCTTCTAGGAACCCGACACCAAGAGGGTCTAGCTTCAACCATACTGACTTCTACTCAATGATGGCTGCCGGTGGCAGGAACTCCAACTTTGGAGCCTCTGATGTTTATGGCCTTTCAGCTTCAAGAGGGCCAACTCCAAGGCCTTCTAACTACGAAGAAGATGGTGGGAAGCCAAAGTTTCACTACCATGCTGGTGGAACTGGACACTACCCTGCACCAAACCCTGGCATGTTCTCTCCATCTAATGGGTCCAAAAGTGTTGCTGCTGCTAATGCAAATGCTAATGCCAAGAAGCCTAATGGGCAGGCTCAGCTGAAACCTGAGGACGGGAATAGGGACCTTCATATGTTTGTTTGGAGTTCAAGCGCTTCACCAGTTTCTGATGTGTTTGGTGCCCATGAATATGGAGGTCATGATCAGAAAGAAGTCAAATTGACTGTATCTCCAGGAAAAGTGGAGAATCATAGAGACACCCAGGAGGACTACTTAGAAAAAGATGAGTTCAGCTTTGGGAACAGAGGAATGGATAGGGAGATGAATCAGCACGAGGGTGAGAAAGTTGGAGATGGGAAGCCAAAAACCATGCCTCCAGCAAGTGTGATGACAAGGCTTATATTGATTATGGTGTGGAGAAAACTCATCAGAAACCCCAACACCTACTCCAGTCTAATTGGCCTCACTTGGTCTCTTGTTTCATTTAGGTGGAATGTTGAGATGCCTGCCATAATAGCAAAGTCTATCTCCATATTGTCAGATGCAGGGCTTGGCATGGCCATGTTCAGTCTTGGTCTCTTCATGGCTTTGCAACCGAGGATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCCATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGACTCAAAGGTGTTCTCCTACACGTTGCCATTGTTCAGGCAGCTCTTCCCCAAGGAATTGTCCCATTTGTCTTTGCCAAGGAATATAATGTACATCCTGATATTCTCAGCACAGCTGTCATTTTTGGGATGTTGATTGCGTTGCCCATAACTCTAGTGTACTACATTTTGATGGGGTTGTGA 1872 0.4631 MNFLVSRTHRIEDFTSHKMITLIDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKIIILVLLAVWSNFTKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARMLISEQFPDTAGSIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAAGGRNSNFGASDVYGLSASRGPTPRPSNYEEDGGKPKFHYHAGGTGHYPAPNPGMFSPSNGSKSVAAANANANAKKPNGQAQLKPEDGNRDLHMFVWSSSASPVSDVFGAHEYGGHDQKEVKLTVSPGKVENHRDTQEDYLEKDEFSFGNRGMDREMNQHEGEKVGDGKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLKGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILMGL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02833 623 NCBIfam auxin efflux carrier 19 623 IPR014024 -
Spst4g02833 623 Pfam Membrane transport protein 27 618 IPR004776 GO:0016020|GO:0055085
Spst4g02833 623 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 19 622 - -
Spst4g02833 623 MobiDBLite consensus disorder prediction 231 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02833 Spst-Chr4 67997160 68003283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02833 19 614 Organic Solute Cotransporters AT1G73590 74.682 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02833 K13947 - gmx:100499637 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00657 3 10027936 10030764 Spst4g02833 4 67997160 68003283 PCT