Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02726 ATGGCGATGGTGGACCAGCCTCTGTATCCGATTGCCGTTTTGATCGACGAGCTGAAGAACGAGGACATTCAGCTGCGGTTGAACTCGATCCGACGGCTCTCCACGATCGCGCGCGCGCTCGGCGAGGAGCGCACGCGGAAGGAGTTGATTCCGTTTCTCAGCGAGAACAACGACGATGACGATGAAGTGCTTCTCGCAATGGCCGAGGAATTGGGCGTGTTCATTCCCTACGTCGGAGGCGTGGAACACGCCAACGTGCTTCTTCCTCCGTTGGAAACGCTCTGCACCGTTGAGGAAACTTGCGTCAGAGACAAAGCGGTGGAGTCGTTGTGTAGGATTGGAGCTCAGATGAGGGAGCAAGATTTGGTTGAACACTTCATTCCTTTAGTTAAGAGGCTGGCTGCTGGCGAGTGGTTCACAGCACGAGTTTCATCCTGTGGTTTGTTCCATATTGTTTACCCTAGTGCGCCGGAGGTGGTGAAGACTGAACTGAGAGCCATATATGGCCAGCTCTGTCAAGATGATATGCCCATGGTTAGAAGATCTGCTGCCACAAACTTGGGAAAGTTTGCTGCTACTGTTGAAGCTCCTCACTTGAAATCAGACATCATGTCTGTGTTTGAGGATCTTACACAGGATGATCAAGATTCTGTTCGGCTACTTGCTGTCGAGGGTTGTGCAGCTCTAGGAAAATTATTGGAGCCACAAGATTGTGTTGCACATATTCTCCCTGTCATAGTCAATTTTTCTCAGGACAAGTCATGGCGTGTTCGTTACATGGTTGCAAATCAACTATATGAGCTATGTGAAGCTGTTGGTCCTGATCCCACCAGGTCAGAATTGGTTCCTGCATATGTTAGGCTGCTGCGTGATAATGAGGCCGAAGTACGTATTGCTGCAGCTGGGAAAGTAACTAAGTTCTCCCGCATATTAAATCCTGAACTTGCCATTCAGCATATTCTACCCTGCGTGAAGGAGCTATCAACTGATTCATCTCAACATGTTCGTTCTGCATTGGCTTCCGTTATAATGGGAATGGCACCGGTTTTGGGGAAGGATGCAACAATTGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGATGAATTTCCTGATGTAAGGCTAAATATTATCAGCAAGCTTGATCAAGTGAATCAGGTTATTGGTATCGATTTGTTATCCCAGTCTCTGTTGCCTGCTATAGTTGAGCTTGCTGAGGATCGGCACTGGAGAGTTCGACTTGCAATCATAGAATATATACCCTTGCTAGCAAGCCAATTGGGTGTAGGCTTTTTTGATGATAAGCTCGGTGCTCTTTGCATGCAATGGCTAAAGGACAAGTTGGAAAGAAATGCTAGAATTTCTCGGGAATGTTGCCATGGAGTTGATTTGGATAGAGTTGTGCACTTAACTTCTTTGTGGTCTAAAGAACTTTCCAGTAGGATTATTGTTGATAGATCTTCTTCGGAGAGATTGGCATTCAGTTTACATGTATACTCTATTCGTGATGCGGCTGCAAATAACATCAAACGCTTAGCAGAAGAATTTGGACCTGATTGGGCAATGCAGCACATTATTCCCCAGGTTTTGGACATGGTTACTGATCCACATTATCTGTATCGGATGACGATCCTACAAGCAATTTCTCTACTAGCTCCTGTTTTGGGCTCGGAGATTACTTCTTCAAAACTGCTCCCTCTGGTCATTAATGCATCAAAAGATAGGGTACCCAATATCAAATTCAATGTAGCCAAGGTGTTGCAATCTCTCATCCCCATTGTTGATCAGTCTGTGGTTGAGAATAGCATCCGTCCGTGTTTGGTTGAGCTCAGTGAGGATCCGGATGTTGATGTTAGGTTTTTCGCCTCTCAAGCACTACAATCTAGTGAGCAAGTTCTTTGTAGTGAAAAAACATTGTCCAGAAGTGAGATGGGTTTTGACGACCACTAA 1953 0.4572 MAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKAVESLCRIGAQMREQDLVEHFIPLVKRLAAGEWFTARVSSCGLFHIVYPSAPEVVKTELRAIYGQLCQDDMPMVRRSAATNLGKFAATVEAPHLKSDIMSVFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDPTRSELVPAYVRLLRDNEAEVRIAAAGKVTKFSRILNPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKLERNARISRECCHGVDLDRVVHLTSLWSKELSSRIIVDRSSSERLAFSLHVYSIRDAAANNIKRLAEEFGPDWAMQHIIPQVLDMVTDPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVINASKDRVPNIKFNVAKVLQSLIPIVDQSVVENSIRPCLVELSEDPDVDVRFFASQALQSSEQVLCSEKTLSRSEMGFDDH 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 164 202 IPR021133 -
Spst4g02726 650 Pfam HEAT repeat 242 270 IPR000357 GO:0005515
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 526 564 IPR021133 -
Spst4g02726 650 Gene3D - 2 629 IPR011989 -
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 604 642 IPR021133 -
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 281 319 IPR021133 -
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 565 603 IPR021133 -
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 320 358 IPR021133 -
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 10 48 IPR021133 -
Spst4g02726 650 SUPERFAMILY ARM repeat 8 629 IPR016024 -
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 242 280 IPR021133 -
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 398 436 IPR021133 -
Spst4g02726 650 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 2 486 - -
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 203 241 IPR021133 -
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 87 125 IPR021133 -
Spst4g02726 650 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 4 448 - -
Spst4g02726 650 ProSiteProfiles HEAT repeat profile. 359 397 IPR021133 -
Spst4g02726 650 Pfam HEAT repeats 361 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02726 Spst-Chr4 67124495 67133758 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02726 K03456 - gmx:100799440 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02726 4 67124495 67133758 Spst4g02726 4 67124495 67133758 ECH