Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02718 ATGGCTTATTTCCTTCTTTCACTTTGCATAATCTTCACAACCCTCTCTCTCACCTCCTCTCGCACCATCACCCCTCCTTCACACACCACTCTTCTCAACATCTCTTCATCCCTTCACCAAGCCCGCCAGATCCTCTCCTTCAACCCCCAAAAAGTTCTACAACAAGCTTTAACCCAACAAGAAACCCCCATTTCACCCGCTTCCTCTTCCTCTTCCTTCTCTCTTCAACTCCACACAAGGGAAACTCTCTACAATGAGCGACACTCAGATTATAGAACCCTACTTTTGTCCCGACTCGCCCGCGATTCTGCCCGAGTAAACTCGCTCGAGACTAAACTTCAGCTGGCAGTCAACAGCGTCAAAAGATCGGACCTTTACCCAACCCAGACGGAGCTTCAACCGGAAGACCTCTCCACACCGATCTCCTCCGGCACCAGCCAGGGCAGCGGCGAGTACTTCGCACGTATCGGCGTGGGCCAGCCCGCAAAGCCCTTCTACATGGTCCTCGACACAGGCTCCGACGTGAACTGGCTCCAATGCAAACCCTGCTCCGATTGTTACCAACAAGCAGACCCGATATTTGACCCGACAACATCCTCCTCGTACTACCCTTTAACCTGCGACTCACAACAGTGTCAGGACCTCGACATGTCGGCGTGTAGAAACAATAGATGCCTCTACCAAGTTTCCTACGGTGATGGATCGTTCACCGTTGGTGAATACGTCACAGAAACGATGACGTTTGGCGGTTCCGGGTCGGTTAGTCGGGTCTCTATTGGGTGCGGGCACGATAACGAGGGGCTATTCGTTGCATCCGCAGGGCTCATTGGACTTGGTGGTGGACCCTTGTCATTAACCTCCCAAATCAAAGCGACATCGTTTTCGTATTGTTTAGTGGATCGCGACTCAGGGAAATCGTCCACCCTGGAGTTTAACTCGCCTCGACCGGGTGACTCAGTCACCGCGCCATTGCTGAGGAACCAGAAGACGAGCACGTTCTACTACGTGCAGCTAATCGGATTCAGCGTTGGCGGAGAGATAGTGTCCATCCCACCAGACACTTTTGCGGTCGACCAGTCCGGTGTTGGTGGCGTGATCGTTGATTCCGGAACCGCAATAACTCGGTTGCGGACTAAGGCTTACAACTCGATCCGCGACGCATTCAAGAGGATGACTCAGAACCTGCGTCCAGCAGAAGGCGTTGCGCTGTTCGACACATGCTACGACCTTTCCTCTCTGCAATCAGTGCGTGTGCCGACAGTGTCGTTTCACTTCGCCGGCGACAAGACGTGGTCGCTACCGGCAAAGAACTATCTGATTCCGGTGGACGGGGCCGGAACTTATTGTTTCGCGTTTGCGCCAACGTCGTCGTCTCTGTCTATCATAGGGAACGTGCAGCAGCAGGGGACACGTGTCAGTTTCGATATGGCAAACTCTGTAGTGGGGTTCTCTCCCAACAAGTGCTAG 1467 0.5344 MAYFLLSLCIIFTTLSLTSSRTITPPSHTTLLNISSSLHQARQILSFNPQKVLQQALTQQETPISPASSSSSFSLQLHTRETLYNERHSDYRTLLLSRLARDSARVNSLETKLQLAVNSVKRSDLYPTQTELQPEDLSTPISSGTSQGSGEYFARIGVGQPAKPFYMVLDTGSDVNWLQCKPCSDCYQQADPIFDPTTSSSYYPLTCDSQQCQDLDMSACRNNRCLYQVSYGDGSFTVGEYVTETMTFGGSGSVSRVSIGCGHDNEGLFVASAGLIGLGGGPLSLTSQIKATSFSYCLVDRDSGKSSTLEFNSPRPGDSVTAPLLRNQKTSTFYYVQLIGFSVGGEIVSIPPDTFAVDQSGVGGVIVDSGTAITRLRTKAYNSIRDAFKRMTQNLRPAEGVALFDTCYDLSSLQSVRVPTVSFHFAGDKTWSLPAKNYLIPVDGAGTYCFAFAPTSSSLSIIGNVQQQGTRVSFDMANSVVGFSPNKC 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02718 488 PANTHER ASPARTYL PROTEASES 56 482 IPR001461 GO:0004190|GO:0006508
Spst4g02718 488 Gene3D Acid Proteases 315 488 IPR021109 -
Spst4g02718 488 Gene3D Acid Proteases 126 311 IPR021109 -
Spst4g02718 488 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 167 178 IPR001969 GO:0004190|GO:0006508
Spst4g02718 488 FunFam Aspartyl protease family protein 2 312 488 - -
Spst4g02718 488 SUPERFAMILY Acid proteases 146 488 IPR021109 -
Spst4g02718 488 Pfam Xylanase inhibitor C-terminal 334 484 IPR032799 -
Spst4g02718 488 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 365 376 IPR001969 GO:0004190|GO:0006508
Spst4g02718 488 FunFam aspartyl protease family protein 2 129 311 - -
Spst4g02718 488 ProSiteProfiles Peptidase family A1 domain profile. 152 484 IPR033121 -
Spst4g02718 488 Pfam Xylanase inhibitor N-terminal 152 311 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02718 Spst-Chr4 67053087 67054553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02718 129 488 Miscellaneous Gene Families AT1G77480 25.679 1.33e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02718 K22683 - gmx:100784849 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02718 4 67053087 67054553 Spst4g02718 4 67053087 67054553 ECH