Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02717 ATGGAAGCTGCATTAAGCACTGCACTTGCCCTTTCACCCAACCAAGTATTCAATGCATTAAATCCTGGAGATAAAAATTTTGCTTTGAAATATTGCAAAGATCGGAGTGTTGTAATGACAGTGGTAGCCACTGGAATATTAGGAAAAGGTGGAGGGTTGGTGGAGAGGCCAACCATAGAGACAACAAAACCTGGTCGGGAATCTGAATTTGACGTAAGGAAATCTAGGAAAACATCCCCACCATACCGAGTTTTGCTGCACAATGACAACTTCAACAAGCGAGAATATGTCGTGCAAGTGTTGATGAAGGTGATACCGGGAATGACAATTGATAATGCAGTTAACATCATGCAGGAGGCACATCATAATGGACTAGCAGTGGTGATCGTTTGTGGTCAAGTGGATGCTGAAGACCACTGCATGCAGTTGAGAGGAAACGGCCTTTTAAGTTCAATCGAGCCAGCTGATGGTGGTGGTTGTTGA 483 0.4389 MEAALSTALALSPNQVFNALNPGDKNFALKYCKDRSVVMTVVATGILGKGGGLVERPTIETTKPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTIDNAVNIMQEAHHNGLAVVIVCGQVDAEDHCMQLRGNGLLSSIEPADGGGC 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02717 160 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 76 154 - -
Spst4g02717 160 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 145 IPR003769 GO:0030163
Spst4g02717 160 Gene3D - 76 154 IPR014719 -
Spst4g02717 160 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 9 160 IPR022935 GO:0006508
Spst4g02717 160 SUPERFAMILY ClpS-like 76 153 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02717 Spst-Chr4 67048351 67050395 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02717 K06891 - gmx:100785379 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02717 4 67048351 67050395 Spst4g02717 4 67048351 67050395 ECH