Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02528 ATGTGGAGGCTGAAGGTAGGAGATGGAGGGAATGATCCGTACATATTCAGCACAAACAATTTCGTGGGAAGGCAGATATGGGAGTATGATCCCGACGCAGGAACTCCCGAGGAACACGCGCAGGTTGAAGAAGCTCGTAACAATTTCTACCTCAACCGCTTCGAGATCAAGCCCTGCGCTGACCTCCTATGGCGCTTTCAGGTTCTGAGAGAGAACCAGTTCAAACAGAGAATAGCAAGCGTGAAGATAGAAGACGGAGAGGAGATAACATACGAGAAAGTGACAGCCGCCGTGAGAAGAGGCGCGCATCATCTATCGGCACTGCAGACAAGTGATGGCCATTGGCCTGCACAAATTGCAGGTCCTCTGTTTTTTCTTCCTCCTTTGGTGTTCTGTATGTATATTACGGGGCATCTTGAATCAGTATTTCCAGAAGAGCATCGCAAAGAAATTCTCCGCTACATATATTATCACCAGAATGAAGATGGAGGATGGGGACTACACATAGAGGGTCATAGCACCATGTTTTGTACTGCACTAAACTATATATGCATGAGGATTCTTGGAGAAGGACCCAATGGAGGTCATGATAATGCTTGTGCTAGAGCAAGAAAGTGGATTCAAGATCATGGTGGTGTAACACATATACCTTCGTGGGGGAAAACTTGGCTTTCGATACTTGGTGTATTTGATTGGTGCGGAAGTAACCCAATGCCCCCAGAGTTTTGGATCCTTCCTTCGTTTCTTCCTATGCATCCCGCTAAGATGTGGTGTTACTGTCGATTGGTGTACATGCCTATGTCTTACTTATATGGAAAGAGGTTTGTTGGTCCAATTACACCTCTCATTTTACAATTGAGAGAAGAGCTATTTACTCAACCCTACGATAAAGTTAATTGGAAGAAAGCACGTCACCAATGCGCAAAGGAAGATCTTTATTATCCTCATCCTTTGATACAAGATCTTATATGGGATAGTTTATACATATTCACCGAGCCACTACTCACTCGCTGGCCTTTTAACAAGCTGGTTAGAGAAAAAGCTCTTGAAGTAACAATGAAGCATATTCATTACGAAGATGAGACTAGTCGATACATTACCATTGGTTGCGTGGAAAAGGTTTTATGCATGCTTGCATGTTGGGTGGAAGATCCAAATGGAGATGCTTTTAAGAAGCATCTTGCAAGGGTGCCAGATTACTTATGGATGTCTGAAGATGGGATGACCATGCAGAGTTTTGGTAGTCAAGAATGGGACGCTGGTTTTGCCGTTCAAGCTTTGCTTGCTACTAACCTAGTTGATGAAATTGGTCCCACACTTGCAAAAGGGCATTATTTTATTAAGGAGTCTCAGGTGAGAGATAACCCTTTTGGAGATTTTAAGAGTATGTATCGTCATATCTCTAAAGGATCGTGGACGTTCTCGGATCAAGACCATGGATGGCAAGTTTCTGATTGCACAGCGGAAGGCTTGAAGAGTAAAAAGGGTGGTTTAGCTGCATGGGAGCCTGCAGGAGCACAGGATTGGTTAGAATTACTCAATCCCACGGAATTTTTTGCGGACATTGTAGTAGAACATGAATACGTTGAGTGCACTGGGTCTGCAATTCAAGCGTTAATTTTGTTCAAGAAGCTGTATCCAGGGCATAGGAAGAAAGAGATAGAGAATTTTATTAGCAATGCAGTTCGATTCCTTGAAAATACACAGACAGCTGACGGCTCATGGTACGGAAATTGGGGAGTTTGCTTCACTTATGGTTCTTGGTTTGCCCTTGGCGGTTTAGCAGCAGCTGGCAAGACTTACACCAACTGTGCTGCTATTCGCAAGGCAGTCCAATTTCTCCTTACAACACAGAGAGAGGACGGTGGATGGGGGGAGAGTTATCTTTCAAGCCCCAAAAAGATTTATGTACCGCTGGAAGGAACCCGATCAAATGTTGTACATACAGCATGGGCTCTCATGGGACTGATTCATGCTGGACAGGCAGACAGAGACCCTACTCCTCTTCATCGTGCTGCAAAGTTGCTCATCAATTCTCAGTTGGAAGAGGGTGATTGGCCCCAACAGGAAATCACTGGAGTATTCATGAAAAATTGCATGTTGCATTATCCAATGTATAGAGATATTTATCCAATGTGGGCTCTGGCTGAATATCGTAGACGAGTTCCATTGCCTTCCACTGAAGTTTAA 2190 0.4416 MWRLKVGDGGNDPYIFSTNNFVGRQIWEYDPDAGTPEEHAQVEEARNNFYLNRFEIKPCADLLWRFQVLRENQFKQRIASVKIEDGEEITYEKVTAAVRRGAHHLSALQTSDGHWPAQIAGPLFFLPPLVFCMYITGHLESVFPEEHRKEILRYIYYHQNEDGGWGLHIEGHSTMFCTALNYICMRILGEGPNGGHDNACARARKWIQDHGGVTHIPSWGKTWLSILGVFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILQLREELFTQPYDKVNWKKARHQCAKEDLYYPHPLIQDLIWDSLYIFTEPLLTRWPFNKLVREKALEVTMKHIHYEDETSRYITIGCVEKVLCMLACWVEDPNGDAFKKHLARVPDYLWMSEDGMTMQSFGSQEWDAGFAVQALLATNLVDEIGPTLAKGHYFIKESQVRDNPFGDFKSMYRHISKGSWTFSDQDHGWQVSDCTAEGLKSKKGGLAAWEPAGAQDWLELLNPTEFFADIVVEHEYVECTGSAIQALILFKKLYPGHRKKEIENFISNAVRFLENTQTADGSWYGNWGVCFTYGSWFALGGLAAAGKTYTNCAAIRKAVQFLLTTQREDGGWGESYLSSPKKIYVPLEGTRSNVVHTAWALMGLIHAGQADRDPTPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPSTEV 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02528 729 Pfam Squalene-hopene cyclase N-terminal domain 99 403 IPR032697 -
Spst4g02528 729 Gene3D - 495 690 - -
Spst4g02528 729 FunFam Lupeol synthase 51 226 - -
Spst4g02528 729 FunFam Uncharacterized protein 267 411 - -
Spst4g02528 729 NCBIfam squalene/oxidosqualene cyclases 490 720 IPR018333 GO:0005811|GO:0016104|GO:0016866
Spst4g02528 729 NCBIfam squalene/oxidosqualene cyclases 97 492 IPR018333 GO:0005811|GO:0016104|GO:0016866
Spst4g02528 729 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 410 IPR008930 -
Spst4g02528 729 CDD SQCY_1 98 718 IPR018333 GO:0005811|GO:0016104|GO:0016866
Spst4g02528 729 FunFam Terpene cyclase/mutase family member 490 725 - -
Spst4g02528 729 Pfam Squalene-hopene cyclase C-terminal domain 489 720 IPR032696 -
Spst4g02528 729 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 351 723 IPR008930 -
Spst4g02528 729 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 493 IPR018333 GO:0005811|GO:0016104|GO:0016866
Spst4g02528 729 Gene3D - 119 414 - -
Spst4g02528 729 ProSitePatterns Terpene synthases signature. 572 586 IPR002365 GO:0016866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02528 Spst-Chr4 65328388 65334650 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02528 K15813 - gmx:547702 1469.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02528 4 65328388 65334650 Spst4g02528 4 65328388 65334650 ECH