Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02523 ATGCAGCAGTTGGCATTTGAGGCTGATGCAGACACGGTTCCAAAAGGCTTCCTGGCTGTTTGTGTAGGGAAAGAGCTCAAGAGATTCATCATTCCCACCCATTACCTGAGACACCAAGCATTTGAGATGTTGCTCCAAGAAGCCGAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTGCTCAAAATCCCATGCCACGTATCACTCTTCCAGAAAATTTTGAAGGCTGTGGAAGACAACAAACAACCCTTGCTGCATCACTCTGGGTTCGATGGAGACAAGGACACCATTAGTTTTTACGCATCAGATTGTGAAGTTACTCCCCCTCATCATCCTCAAACTTGTACATAG 348 0.4626 MQQLAFEADADTVPKGFLAVCVGKELKRFIIPTHYLRHQAFEMLLQEAEEEFGFQQEGVLKIPCHVSLFQKILKAVEDNKQPLLHHSGFDGDKDTISFYASDCEVTPPHHPQTCT 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02523 115 Pfam Auxin responsive protein 9 75 IPR003676 GO:0009733
Spst4g02523 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 72 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02523 Spst-Chr4 65297981 65298585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02523 2 113 Calmodulin-binding Proteins AT4G31320 49.573 5.11e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02523 K14488 - jre:109012982 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02523 4 65297981 65298585 Spst4g02523 4 65297981 65298585 ECH