Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02522 ATGTCCTCCTCCAACACTCACTCTGACTCCAAACCTCAGCCTCAGGAAGCTAACATGGCATTGCGAACCCATTCCCATTCCCTCAACAACAACAACAACAACAACAACAACAAGTATGGCCACGGCGTCTTTGGAGACGTCTACAGCATCATCAAAGACATGGAGATCGATCATCACAACTCTACCTTGGATTTTCAATTTCGCCTTCCTCCACTTACAAATTTTCTGTCTAGAGAGGCTCGCGAGTTTATCAGCGGTGCTCTTGCAGGGGCCATGACAAAGGCTATACTTGCTCCTCTTGAGACCATCAGGACAAGAATGGTTGTTGGTGTTGGGTCCAAAAATATTGCTGGTAGTTTCATAGAGGTTATAGAGCAGCAGGGATGGCAAGGATTGTGGGCTGGAAACATGATCAATATGCTTCGTATAGTTCCGACACAGGCCATTGAGCTAGCTACATTTGAGTGCGTCAAACGGGCTATGACATCCCTCCACCACAAATGGGAACACACTGAATACCCCAAGTTGCACATAGGTTGCATCAATTTCAACTTGCCCTTATCTTGGATTTCACCGGTCGCTGTCGCTGGTGCTGCAGCAGGAATTGCTAGCACAATTGTATGCCATCCCCTCGAAGTTTTGAAGGACCGGCTAACAGTAAGTCCTGAAATCTACCCTTCTTTAGGTATTGCGATTAGAAATATTTACAAAGATGGTGGTGTTGGCGCTTTTTATGCCGGTATTTCACCAACTTTAGTTGGGATGCTTCCATACAGTACATGTTATTATTTCTTGTATGATACAATGAAGGATTCGTACTGCCAGACCAAAAATAAGAAATCTCTAAATCGCCCAGAGATGCTTTTGATTGGAGCCCTAGCAGGTTTTACTGCCAGTACAATTAGCTTCCCATTGGAAGTGGCTAGGAAGCGGCTGATGGTGGGCGCTTTGCAAGGTAAGTGCCCACCAAACATGGCAGCGGCACTAACAGAAGTAATTAGGGAAGAAGGTCTGAAGGGTCTCTACAGAGGATGGGGTGCGAGCTGTTTAAAGGTCATGCCATCCTCTGGTATCACCTGGATGTTTTATGAAGCATGGAAAGACATATTGCTTGTCCAGAATGGTAATCCCTTTTAG 1137 0.4565 MSSSNTHSDSKPQPQEANMALRTHSHSLNNNNNNNNNKYGHGVFGDVYSIIKDMEIDHHNSTLDFQFRLPPLTNFLSREAREFISGALAGAMTKAILAPLETIRTRMVVGVGSKNIAGSFIEVIEQQGWQGLWAGNMINMLRIVPTQAIELATFECVKRAMTSLHHKWEHTEYPKLHIGCINFNLPLSWISPVAVAGAAAGIASTIVCHPLEVLKDRLTVSPEIYPSLGIAIRNIYKDGGVGAFYAGISPTLVGMLPYSTCYYFLYDTMKDSYCQTKNKKSLNRPEMLLIGALAGFTASTISFPLEVARKRLMVGALQGKCPPNMAAALTEVIREEGLKGLYRGWGASCLKVMPSSGITWMFYEAWKDILLVQNGNPF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02522 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 160 IPR018108 -
Spst4g02522 378 PANTHER SOLUTE CARRIER FAMILY 25 78 370 - -
Spst4g02522 378 Gene3D Mitochondrial carrier domain 76 374 IPR023395 -
Spst4g02522 378 Pfam Mitochondrial carrier protein 286 371 IPR018108 -
Spst4g02522 378 Pfam Mitochondrial carrier protein 80 162 IPR018108 -
Spst4g02522 378 Pfam Mitochondrial carrier protein 194 273 IPR018108 -
Spst4g02522 378 PRINTS Mitochondrial carrier protein signature 135 155 IPR002067 GO:0055085
Spst4g02522 378 PRINTS Mitochondrial carrier protein signature 291 313 IPR002067 GO:0055085
Spst4g02522 378 PRINTS Mitochondrial carrier protein signature 95 109 IPR002067 GO:0055085
Spst4g02522 378 PRINTS Mitochondrial carrier protein signature 82 95 IPR002067 GO:0055085
Spst4g02522 378 PRINTS Mitochondrial carrier protein signature 245 263 IPR002067 GO:0055085
Spst4g02522 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 282 369 IPR018108 -
Spst4g02522 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 188 272 IPR018108 -
Spst4g02522 378 SUPERFAMILY Mitochondrial carrier 81 364 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02522 Spst-Chr4 65292289 65294793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02522 66 378 Organic Solute Cotransporters AT3G20240 74.121 7.34e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02522 - - gmx:100777341 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02522 4 65292289 65294793 Spst4g02522 4 65292289 65294793 ECH