Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02506 ATGAGGTTACAATGTTATACCAGAAACATGGAGCCACCAATAACCATTGTGCACTTAGAGTGTGTGGCCTTGTTCATATTGTGCACAACAGTGTTTGTTTCCGCTACTTCTCAGCAGAAAGAGGCGAGTTACCTGAAAATGGTGGTGAACGCGAGCAAGTTGCCAGTGGAAGATTACTACGACTACATCGTCGTGGGTGGTGGCACTGCGGGGTGCCCACTGGCGGCGACACTCTCACAGTCGTTTAGGGTGCTTCTGCTGGAACGAGGGGGCGATGGGCGGGGGAACCCCAACCTGATGAACCAAGAAGGGTTCTTGAGCAACCTCTTGAACACTGACAATGAGGACTCTGCCACCCAGGCTTTCATTTCCGAGGAGGGAGTCCCCAACGCCCGTGGCCGAGTTCTTGGGGGCAGCAGCGCCATCAACGCCGGCTTCTACAGCCGAGCCCACCGCGATTTCTTCGGGAATTCGGGCTTGCACTGGGACCTGACGCTGGTGAACCACTCGTATCAATGGGTGGAGAAGGAAATCGTCTTCAAGCCCAACCTCAAGACGTGGCAATCGGCGGTTCGCGATGGCTTGCTGGAAGCAGGGGTCACTCCCTACAACGGCTATACTCTCGACCACGCCAAGGGAACCAAGATTGGGGGCTCCACCTTCGACAGCTCCGGCAGACGACACACCTCTGCGAATCTTCTCAGACACGCTCGTCCATCCAACATCAAGGTTGCTGTTTACGCCACCGTGGAGAGGCTGCTTCTCTCTGGTTCCAGCGCCATCGGAGTCCTCTACCGCGACCGGAGAGGGATCCACCACCACGCATTCTTGCTGGAACACGGAGAGGTGATTCTGTCGGCCGGTGCCATTGGAAGCCCTCAGCTTCTTCTTCTGAGCGGAATCGGTCCCAGGCCTTATCTCTCTTCCTGGGGAATCCCCGTCGCTCACCACCTTCCATACGTAGGACATTTCCTCTACGATAATCCCAGGAACGGAATCACCATTCTCCCCTCCCTTCCACTCGACCATTCTCTCATCCAAGTCGTCGGGATTACCGACTCCGGCGCTTACATCGAGGCCGCATCTAACGTCGTTCCTTTCAACTCCCCTCCCCACACCGCCTTCGTCCGCTCCCCCCTCTACCTCACCGTCGCCACCCTCATTTCCAAGATCTCCGGCCCTCTCTCGGCCGGCTTTCTCAGACTCGCTTCCACCAACGTCGACGCCAATCCCATTGTGAGGTTCAATTACTTCAACAACCCCCTTGACCTGGAGCGCTGCGTCAACGGGAGCAGGAAGATAGGGCAGATCCTCGGGAGCAGGGCCTTGAAGGACTTCAAGTTCACTAACTGGTTGGGGGAGCCAGACTTCAGGTTTATTGGCCCCGCTTTGCCCCTTCACCAAACGGACTACTCTCGCATGGCCGATTTCTGCCGCCGGACTGTCTCCACCATTTGGCACTACCACGGCGGCTGCGTCGTTGGCAGGGTCGTTGATCCCCATCTCAAGGTCATCGGAATCTCTTCCCTTCGTATTGTTGATGGATCCGTCTTTAGCGTATCGCCTGGAACCAATCCTCAGGCCACCCTCATGATGCTCGGACGGTATTTTGGGTTCAAGATTCTCAGAGAAAGGGACGCATACAAATGA 1650 0.5624 MRLQCYTRNMEPPITIVHLECVALFILCTTVFVSATSQQKEASYLKMVVNASKLPVEDYYDYIVVGGGTAGCPLAATLSQSFRVLLLERGGDGRGNPNLMNQEGFLSNLLNTDNEDSATQAFISEEGVPNARGRVLGGSSAINAGFYSRAHRDFFGNSGLHWDLTLVNHSYQWVEKEIVFKPNLKTWQSAVRDGLLEAGVTPYNGYTLDHAKGTKIGGSTFDSSGRRHTSANLLRHARPSNIKVAVYATVERLLLSGSSAIGVLYRDRRGIHHHAFLLEHGEVILSAGAIGSPQLLLLSGIGPRPYLSSWGIPVAHHLPYVGHFLYDNPRNGITILPSLPLDHSLIQVVGITDSGAYIEAASNVVPFNSPPHTAFVRSPLYLTVATLISKISGPLSAGFLRLASTNVDANPIVRFNYFNNPLDLERCVNGSRKIGQILGSRALKDFKFTNWLGEPDFRFIGPALPLHQTDYSRMADFCRRTVSTIWHYHGGCVVGRVVDPHLKVIGISSLRIVDGSVFSVSPGTNPQATLMMLGRYFGFKILRERDAYK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02506 549 Gene3D - 180 484 - -
Spst4g02506 549 Gene3D - 60 534 IPR036188 -
Spst4g02506 549 SUPERFAMILY FAD/NAD(P)-binding domain 46 544 IPR036188 -
Spst4g02506 549 PIRSF Alcohol_oxidase 352 549 IPR012132 GO:0050660
Spst4g02506 549 PIRSF Alcohol_oxidase 34 361 IPR012132 GO:0050660
Spst4g02506 549 Pfam GMC oxidoreductase 394 535 IPR007867 GO:0016614
Spst4g02506 549 ProSitePatterns GMC oxidoreductases signature 2. 288 302 IPR000172 GO:0016614|GO:0050660
Spst4g02506 549 Pfam GMC oxidoreductase 60 328 IPR000172 GO:0016614|GO:0050660
Spst4g02506 549 SUPERFAMILY FAD-linked reductases, C-terminal domain 325 491 - -
Spst4g02506 549 PANTHER OSJNBA0019K04.7 PROTEIN 28 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02506 Spst-Chr4 65174066 65175914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02506 19 548 Miscellaneous Gene Families AT5G51950 44.615 5.61e-152 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02506 K08248 - gmx:100820069 911.753