Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02501 ATGGCTGCTGCGACTGCTGGGGTTGTTGGTGGTAATGGTTCATCTGCTTCCTGGATGCAATTTAGAGGCAAGGAAAGGAAGCATACCAAGGTGAACAAATCTAGTGTTTCTTGCTCTTATTCTTCTTCTGTGATGGATCCTTACAAGACCTTGAGAATACAACGAGATGCCTCTGAAACTGAAGTCAGGAAGGCTTTCAGAAAGCTTGCTCTGCAGTACCATCCAGATGTGTGCAGAGGGAGCAATTGCGGGGTGCAGTTTCACAAGATCAATGAGGCTTATGATATTGTGATGGCGAGCTTGAGAGGAGAAACAAATACGACAGAAACTTATGAAACTTATTATGATTCTGACATGGATGAGCCTATGAGGGGAATGAATGATCCAGATTGGGACATGTGGGAGGAATGGATGGGGTGGGAAGGAGCAGGAATCCGTGATTACTCCTCTCATATTAATCCCTACATTTGA 471 0.448 MAAATAGVVGGNGSSASWMQFRGKERKHTKVNKSSVSCSYSSSVMDPYKTLRIQRDASETEVRKAFRKLALQYHPDVCRGSNCGVQFHKINEAYDIVMASLRGETNTTETYETYYDSDMDEPMRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPYI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02501 156 CDD DnaJ 46 96 IPR001623 -
Spst4g02501 156 ProSiteProfiles dnaJ domain profile. 46 115 IPR001623 -
Spst4g02501 156 PANTHER CO-CHAPERONE PROTEIN DJLA 33 154 - -
Spst4g02501 156 FunFam chaperone protein dnaJ 8, chloroplastic 19 107 - -
Spst4g02501 156 PRINTS DnaJ domain signature 82 102 IPR001623 -
Spst4g02501 156 PRINTS DnaJ domain signature 48 66 IPR001623 -
Spst4g02501 156 PRINTS DnaJ domain signature 66 81 IPR001623 -
Spst4g02501 156 SMART dnaj_3 45 102 IPR001623 -
Spst4g02501 156 Gene3D DnaJ domain 19 103 IPR036869 -
Spst4g02501 156 Pfam DnaJ domain 46 98 IPR001623 -
Spst4g02501 156 SUPERFAMILY Chaperone J-domain 42 144 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02501 Spst-Chr4 65152141 65153177 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02501 - - gmx:100780336 238.81