Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02498 ATGGCTCAATTCTCACTCTCTTCATCTGCAAAGCACTCTTCTTCTCCTTCTTCTTCGTTGACCAACATAAACAATTTATCAGATGATGTCTTGGCAGAAATATTTGTTCAAATGCCATTCAGATCCATTCTGAAGTGTAAGTGTGTGTGCAAACGATGGTTGAGGATGATCTCAAGTGCTTCTTTCCCAACAGAATTTGTGTCCCGCCAACACTCTCTCTTCAGCACTTACTTGACCTTCCTCTCGTCCCACCAACTCATTCTCGGTTTCTTTCCAAGAGATTCGGACTTGAATGTTCAAACCCACATGGTACCTCTATCTCCAGACACGCTCATACGGGGGGACGTTTGTGGCTATTCGAACGGCTTGTTTTTGTGCTGCAGTAACAGATACACGACTGGTCGTGGCTACTTCGTGTACGATCCACTCACCAAGCAATGCACCCATATACCATCTTTTCCTGATGCAGATGAGGGTCAAGGGTTATACGCTGTTGGCTTCCTTTCTCATACTCATCATCCCAAACAAGGAGAGGATGGAGGGCGTTCTAGTCGCTGCTTCTGGGTGGTCATTATAAGAACCTTTATAAGAAGAAAGTATGAGTTTGAAGTGGATGCTTTCTCCTCCGAGAGAGGAAAATGGAGACAAGCATATGCGAGTTGCGCGGAGGGCTTTGCTTTTGCTCCTCACTGGATGCTCAGTTTTGCTTTTGGAGGGTACCTGTATTTCATGGGGAGTATTAATATTTTTGTGTTTGATCCTAAGTTTTTGTTTTCTAGCACAATTGATTACCCTCAAGATGCTGATGCTATGAATATAATGAGCTTTGGATTCCTTGGATGCTCTGGTGGGACTCTGAGGATCGCTGATATTGGCAAAAATGAGTTGAGAGTGTGGGAACTAACGAACCCTCAGAGATGGCATTTGGTGCACAAGACCAATTTCTCAGAACACCTTCCAACCTCATTTTGCAGTAATTATTATAAACGTGTAGCGGGTTTCCATCCCTATGATGGAGATACTGTGTATTTGTATTCCTATGTTGATGGGATTTTTGTTGCCAACCTACGTACCAAAAAATTTGAGCCAATATCTGGTTATGACAAATCAGATATTAGTCCCTTTCAAGTGGAACTCTCTCCAATTCCATATGCATGA 1158 0.4309 MAQFSLSSSAKHSSSPSSSLTNINNLSDDVLAEIFVQMPFRSILKCKCVCKRWLRMISSASFPTEFVSRQHSLFSTYLTFLSSHQLILGFFPRDSDLNVQTHMVPLSPDTLIRGDVCGYSNGLFLCCSNRYTTGRGYFVYDPLTKQCTHIPSFPDADEGQGLYAVGFLSHTHHPKQGEDGGRSSRCFWVVIIRTFIRRKYEFEVDAFSSERGKWRQAYASCAEGFAFAPHWMLSFAFGGYLYFMGSINIFVFDPKFLFSSTIDYPQDADAMNIMSFGFLGCSGGTLRIADIGKNELRVWELTNPQRWHLVHKTNFSEHLPTSFCSNYYKRVAGFHPYDGDTVYLYSYVDGIFVANLRTKKFEPISGYDKSDISPFQVELSPIPYA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02498 385 Gene3D - 19 72 - -
Spst4g02498 385 Pfam F-box domain 24 60 IPR001810 GO:0005515
Spst4g02498 385 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 26 359 - -
Spst4g02498 385 MobiDBLite consensus disorder prediction 1 20 - -
Spst4g02498 385 SUPERFAMILY F-box domain 16 93 IPR036047 GO:0005515
Spst4g02498 385 SUPERFAMILY Galactose oxidase, central domain 100 365 IPR011043 -
Spst4g02498 385 SMART fbox_2 26 65 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02498 Spst-Chr4 65143512 65144669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02498 - - ccaj:109807229 420.239