Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02487 ATGTCGGGCCCACCCAGAGTCCGATCCATGAACGTCGCTGACCCCGACTCTCGTCCGGTACTCGTCCCAGCTGGCAACAAGGTCCGACCCGCTTTCGAAGGACGAAAGCCGGTGAAGAAATCGACGCCGGAGTCCGAGAAGAAGCCGGTGGCGCATACGAATGCGCCACCTCAATGCGTCTCGGTTCCGCCGCCGGTCATTTTGCGGCGGCAGGAGCGTCACCAGGCCATGCTGAAGAACCTGTCGTCGATGAACGCTTCGTGCTCCTCCGACGCGTCGTCGACAGATTCCTCCACTCACAGCAGCGGCGCGTCGTCTAGCGGGAAGGTGGCGCGTCGCGTTAGTGTGCAGTTGAGGAAGAAACAGTGTGCTCCCAAGACGGAGAAGGTAAGTAGTGACAATGTGAGTGGTTCGGATGATACTGATTTGAGTGATACCTTGGAGGGCAAGAAAAGGTGTGCTTGGGTTACACCAAATACAGAGCCATGCTATGTTGCTTTTCATGACAGTGAATGGGGAGTTCCTGTCCATGAAGACAGGAAACTGTTTGAGTTGCTCAGCTTCTCTGGAGCCTTGGCTGAGCTTACATGGCCTACTATCCTAAGCAAAAGGCAGTTATTTCGGGAAGTCTTTTTGGATTTTGATCCAATTGCTGTTTCTAGAATGAACGAGAAGAAGATAGCTGCACCAGGAAGTCCTGTCAACTCATTGCTATCAGAACTCAGGTTGCGAACAATAATTGAAAATGCACGTCAGATGTGTAAGGTAATTGAAGAGTTTGGGTCTTTTGAGATTTTTATTTGGAACTTTGTAAACCACAAGCCTATAGTGAGCCAGTTCAAGTATCCGCGCCAGGTACCTGTGAAATCTCCAAAAGCTGAAGTCGTAAGTAAAGACCTTGTAAGGAGAGGTTTCAGGAGTGTTGGACCAACAGTCATTTATACTTTCATGCAAGTGGCTGGCCTAACAAATGACCACCTTATAAGTTGCTTCAGATTCAAGGAGTGTACCTCCAGTGCAGAAGCATTGGGCAAAGAGAGCTCCCTAAACTCTAAGCTCAAAGAGAAGGCAAACAATGAGCCAACTGAGGTGGGTCTGTTACTGGCTGTCAACAAATTGAACTTCACCCCTAAATAG 1137 0.4952 MSGPPRVRSMNVADPDSRPVLVPAGNKVRPAFEGRKPVKKSTPESEKKPVAHTNAPPQCVSVPPPVILRRQERHQAMLKNLSSMNASCSSDASSTDSSTHSSGASSSGKVARRVSVQLRKKQCAPKTEKVSSDNVSGSDDTDLSDTLEGKKRCAWVTPNTEPCYVAFHDSEWGVPVHEDRKLFELLSFSGALAELTWPTILSKRQLFREVFLDFDPIAVSRMNEKKIAAPGSPVNSLLSELRLRTIIENARQMCKVIEEFGSFEIFIWNFVNHKPIVSQFKYPRQVPVKSPKAEVVSKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECTSSAEALGKESSLNSKLKEKANNEPTEVGLLLAVNKLNFTPK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02487 378 MobiDBLite consensus disorder prediction 84 145 - -
Spst4g02487 378 PANTHER OS04G0501200 PROTEIN 5 342 - -
Spst4g02487 378 MobiDBLite consensus disorder prediction 128 142 - -
Spst4g02487 378 SUPERFAMILY DNA-glycosylase 151 336 IPR011257 GO:0003824|GO:0006281
Spst4g02487 378 MobiDBLite consensus disorder prediction 84 112 - -
Spst4g02487 378 MobiDBLite consensus disorder prediction 1 64 - -
Spst4g02487 378 MobiDBLite consensus disorder prediction 32 47 - -
Spst4g02487 378 Gene3D Hypothetical protein; domain 2 150 333 - -
Spst4g02487 378 Pfam Methyladenine glycosylase 159 332 IPR005019 GO:0006284|GO:0008725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02487 Spst-Chr4 65076878 65080965 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02487 K01246 - gmx:100805836 609.372