Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02479 ATGGGGAGGAAGCTAACCCAGCATCCTGAAGTGTCTGCATTGTCTCTGTTTAATGTAAAACCATTTATTAACAGTGAACAAATTTCCCCAGATCTTCTTAGACCTCTGTTGGATAGTGTAGGGAATGAAAATCAGACTATTTCACCTATGTCTTGGACATTGGGAGAGAAAGTAATTAGCAACTGTACTGTTAAGCTCAAGCCTTATCTCATGAAGGCAGTGGAGTCCTCAGGAAGAGCTCTAAATGGGTATGCACAGATAGTAAGTGATATTTGCCAGAATGAATCTGAATCTCCTCAATGTGATGATTCAAATGTATTAATTTGGCTGCTTATTGGAAACCATGGAACGAATTTAGCTGACTTCTGCAAGTTCTCTAGAAACTTGATTGCTGCTGTTGTTTTCATTGGATTGGTTGTGTCAATGCTTCAGGTTCAGGAAGATGAAAGCAAGCTTAATGTTCCTAATGATGCAAAGGATCAAACGTGTGATGAAACCAAGGGGCAGGAACCTGATGTTACTGGTCAGAGAAATGTCCAGAGTTTAGACGATACAGAGCCAAACAGAAGTGCCACTATAGATGGTGAAGCTATAAAAAAATCTGGTTCAAAAAGGAGATCACATTTTGAAATTACTAAGAACTCCAGAAGAGGAAGTGCGAAAGCCAAGTTGGAAACTGACAATTTAGAGTCTGCTCAGGAACCAAAATCAGAAACTCAGCTGAATAGTGTGCCAAGGAAGAGGGGGCGTAAGCCTAATTCTTTAATGAATGCAGAAGAAGGATATGATCACTCGTGGGTTTGTCGGGAAACTAAAGTTGGAAACTCAACTCTATCCAGAAAGACTCGCAATTGCAGCGCTCCATTTCCATCTTCTGAAAAATCTACTTCAAAAACAGGTAAGTTGCATGGAAAGCCTAAAACGGTAAGTGAAACTCCAGTTTATGAGCCGAAAAGTGAGAATATAGCAAAACCTGCCAAATCCAAAAGGACTCATAATATTGCAAGTGATTTTCCCCCTAATGATACAAGTGAAGGTCGTGAAGCTTTATCTTCTAAACCTAAAACTGATGAGTATACTGATGTTTCTCCTTCTATAAATAATAACATTTCTGATGGATGTCACATCAAACGAGGTCAGAGAAGGAAAAAAAATAGCATCGGGAATCAAGGTGTTCATTCCAATTCTTTGTCAATGTTAAAGGAAGACAACTTGACTTTTGGATTTGGCAGGTTGGATAAGGAATCTGAAGTAAGGAATGACTCTGAACAAAAACCCATTAGGAGAATCAAATTTTCTGTAAAGATTGATGGGAAACTTGTCATGGCTCCAGAATCAGTTGCTAAGAGGGAGCCTAATGTTCCATGTGGAGACGAGGGGAAACACAAATCATCTATGAATGATGAGCTAGAAAATATTGAAAAGATCAGATTCTCAACTCAAACAAATGTTAAGAAAAGAAGGAGGCTTGATGCTACTCCTAATGAGGGCCTCAACAAATCATCAGCTCTGAAGGAGCTGATTGCAGAATCTGCAAATAAAACATTAAATGGTGTCATGGAAATCCCACAAGCAAGACTGAGGAGAAGACACAGTAATGTAAGTGCAGAGGTATCTGAATCTCATCACTGTGGTAACTCATTGGTTGGTAGTAAAATCAAGGTCTGGTGGCCAAAGGATAAGACGTTTTATGAAGGTGTTATCGAATCTTATGATCCTATCAAAGGAAAGCACAAGATTTTGTATGCCGATGGTGATGTTGAAGTGTTGAACCTCAAAAGACAGCGTTGGAAACTAGTTGCTGTTGATGTTTCGTTAGACGAGGAAGGACTTGCACTTCAGAGGCTTGCAGAAGCATCAGACATATTGGAGTTTGGAAGATTTGTGCATGCTCTTATTCTTGACTTTGACTATGTCAAGTATGAATCTCTCTCTCGCACCAACCCAAGCACTAGGTAG 1959 0.3961 MGRKLTQHPEVSALSLFNVKPFINSEQISPDLLRPLLDSVGNENQTISPMSWTLGEKVISNCTVKLKPYLMKAVESSGRALNGYAQIVSDICQNESESPQCDDSNVLIWLLIGNHGTNLADFCKFSRNLIAAVVFIGLVVSMLQVQEDESKLNVPNDAKDQTCDETKGQEPDVTGQRNVQSLDDTEPNRSATIDGEAIKKSGSKRRSHFEITKNSRRGSAKAKLETDNLESAQEPKSETQLNSVPRKRGRKPNSLMNAEEGYDHSWVCRETKVGNSTLSRKTRNCSAPFPSSEKSTSKTGKLHGKPKTVSETPVYEPKSENIAKPAKSKRTHNIASDFPPNDTSEGREALSSKPKTDEYTDVSPSINNNISDGCHIKRGQRRKKNSIGNQGVHSNSLSMLKEDNLTFGFGRLDKESEVRNDSEQKPIRRIKFSVKIDGKLVMAPESVAKREPNVPCGDEGKHKSSMNDELENIEKIRFSTQTNVKKRRRLDATPNEGLNKSSALKELIAESANKTLNGVMEIPQARLRRRHSNVSAEVSESHHCGNSLVGSKIKVWWPKDKTFYEGVIESYDPIKGKHKILYADGDVEVLNLKRQRWKLVAVDVSLDEEGLALQRLAEASDILEFGRFVHALILDFDYVKYESLSRTNPSTR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02479 652 SUPERFAMILY Tudor/PWWP/MBT 546 587 - -
Spst4g02479 652 CDD Tudor_Agenet_AtEML-like 549 599 - -
Spst4g02479 652 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 179 608 IPR039776 GO:0007064
Spst4g02479 652 MobiDBLite consensus disorder prediction 152 171 - -
Spst4g02479 652 MobiDBLite consensus disorder prediction 276 297 - -
Spst4g02479 652 MobiDBLite consensus disorder prediction 172 188 - -
Spst4g02479 652 MobiDBLite consensus disorder prediction 356 374 - -
Spst4g02479 652 MobiDBLite consensus disorder prediction 150 257 - -
Spst4g02479 652 MobiDBLite consensus disorder prediction 276 395 - -
Spst4g02479 652 Gene3D - 540 594 - -
Spst4g02479 652 FunFam Binding protein 544 596 - -
Spst4g02479 652 MobiDBLite consensus disorder prediction 198 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02479 Spst-Chr4 65016882 65024186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02479 - - vra:106773633 804.283