Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02475 ATGCCGCTGATTTTACCGAAAAGCGATTCGATCCAGATTCGCGAGGTGTGGAATTATAACCTGGAAGAGGAGTTTGGGTTGATTCGCGAAATCGTGGATGATTACCCATACATCGCGATGGACACGGAATTTCCGGGGATCGTTCTCCGACCGGTGGGGAATTTCAAGAACAGCTACGATTACCATTACCAAACCCTAAAGGACAACGTCGACATGCTTAAGCTCATCCAATTGGGCCTCACCTTCTCCGACGAGCACGGCAACCTTCCAACTTGTGCTGCCATCGACGCCGATGACGATTCCCACACGTTTTGTATCTGGCAATTCAATTTCCGGGAGTTCAACGTTAACGAGGACGTCTTCGCTAACGATTCAATCGAGCTTTTGCGCCAGAGCGGCATCGATTTCAAGAAGAACAACGAAGACGGCATTGACGCCCACCGTTTCGGGGAGCTTCTCATGTCGTCCGGGATCGTTTTGAATGACAACGTTCATTGGGTTACTTTTCATAGCGGTTACGATTTCGGGTACTTGTTGAAGCTCTTGACGTGTCAGAATTTGCCCGATACGCAAGTGGGGTTCTTCAATTTGATTAACATGTATTTCCCCACAGTGTATGACATCAAGCACCTCATGAAGTTCTGCAACAGCCTTCACGGTGGCTTGAACAAGCTCGCCGAGTTGTTGGAGGTCGAGAGGGTCGGGATTTGCCATCAGGCTGGTTCAGATAGTTTGCTCACTTCATGTACATTCAGGAAATTGAAGGACAATTTCTTTAGTGGCTCGATGGAGAAGTATGCTGGTGTTTTGTATGGGTTAGGTGTTGAGAATGGACAGGGTGCTCATTGA 849 0.4817 MPLILPKSDSIQIREVWNYNLEEEFGLIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYDYHYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCAAIDADDDSHTFCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKKNNEDGIDAHRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCQNLPDTQVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKDNFFSGSMEKYAGVLYGLGVENGQGAH 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02475 282 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 274 IPR039637 GO:0004535|GO:0030014
Spst4g02475 282 FunFam Putative CCR4-associated factor 1 7 4 277 - -
Spst4g02475 282 Pfam CAF1 family ribonuclease 16 144 IPR006941 -
Spst4g02475 282 Gene3D - 1 277 IPR036397 GO:0003676
Spst4g02475 282 SUPERFAMILY Ribonuclease H-like 4 275 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02475 Spst-Chr4 65004603 65005451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02475 K12581 - gmx:100789409 546.199