Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02474 ATGATAGCTTGCGTGTCTGGAGGTTGTCGTGGCTTTGCCATTGCCCTCATCAGATTGTACCATTGTGATTCGGTCATAATTAAGGAGGCTGCATGGGATAAGGGAAAAGGGGGCGAAATGAAAGGGATTGGAAATCGTTTGGTTTACTTTGGGTTGTTGTATTGGTTGTACTCATTTCGTGAAGATGTGATGGAGTTCCAAGGAAGACCGTTGTTTGCTTGTTTTACAGTACTTTTTACGCAAGGTAGAACTTCAATGGACTACAGCTCAGAAGAAGATTCAGATATAAGTGAATCTGAGATTTATGAGTACTCAGAGAAACCATATGAGCTATTAAGGGCAGGAGAATACAAGGTTAAAAATTTGAATGGAACTCTTAGATGCCCTTACTGTGCTGGGAAGAAAAAACAAGATTACAAATATAAGGATTTATTGCAACATGCATCTGGAGTTGGTAAGGGTTCTGCTAACAGAAGTGCGAAACAAAAGGCAAATCACCTTGCCCTAGCAAAGTATTTGGAGAATGATCTAGCCAGTGAAGCAGAGCCAATTCAGCACCCAGCTTTACCCCTAGCTGTCAATCAACCTTCATCCCAAGAAGATCTTTTTTATGTTTGGCCTTGGACAGGCATAATTGTTAACATAAAGGGTAAACCTATTGATTCAGGGCACTGGTTGAAAGAATTTTCTAAATTCAGACCAATTCATTTCCATATATTCTTCAAAGATGGTGACATGACAGCTCAAGGTGTAATAGACTTCAATAATGACTGGAATGGTTTCATAAATGCAAGTGAATTTGAGAAGTCATTTGAAACTGCACGTCATGGTAAAAAGGATTGGAATACAAGGGAGTTAGAAGCTGGCTCAAACATTTATGGATGGGTTGCACGGGAAGATGATTATAATTGTGGAGGGCCAATAGGGGAATACCTCCGCAACAAAGGAAGGTTGAGGACCGTTTCTGATATTGTTCAAGAAGCATCAGAAAGCAGAAACAGTATTGTGACAAACCTCACCAACGAAATCGAGATTACTAATGAAAACCTTGACAAGATGCAGTCCAAGTTTAATGAGAAGACTATGTCCTTGAGTAGGATGCTTGACGAGAAAGATAAGCTTCACAATGCTTTTGAAGAAGAATCAAGGAATATGCAGCGTAGAGCACGGAACGAGGTACGGCGCATCTTGGATGAGCAAGAAAAGTTGAGTAGTGAATTGGAGGAGAAAAGGCGAAAGCTTGATTCTTGGAGTAGAGATCTAAACAAGCGTGAGGTACTCACTGATCAAGAGAGGCAGAAACTTGCGGAGGAAAAGAAGAAGAAAGATTTGAGGAATGAATCACTGTTGCTGGCTTCAAAAGAACAGAAGATAGCGGATGAGAATGTCTTAAGGCTTGTTGAAGAGCAGAAGAGAGAGAAAGAGGAGGCCTATAACAAGATTCTTCAACTGGAAAAACAGCTTGATGCCAAACAGAAATTGGAAATGGAAATTGAAGAGCTAAAAGGGAAATTGCAAGTAATGAAGCATCTTGGAGATGAAGATGATACAGCTGTTCAGAATAAGATAAAAGAAATGAATGATGAATTGCAAGAAAAAGTAGATAATTTGGAAAATTTGGAGGCTATGAATCAAACCCTTGTTGTGAAGGAGCGCCAGAGTAATGATGAACTACAAGAAGCTCGCAAAGAACTAATAAAAGGGTTAGAGGATATGCTGAATGGCCCTAGAATTACTATTGGGCTCAAGAGAATGGGAGAGCTTGATCAGAAGGTTTTTGTGACTAATTGCAAGAAAATATTTTCTCCGGAAGAAGCTGGGACCAAAGGTGTCGAGCTTTGTTCTTTGTGGCAGGAAAATGTGAAGAATTCAGCTTGGCATCCATTTAAAGTGATCACAGTCAACGATAAAGCAGAGAATATTATAGATGAGGATGATGACCAGTTAAGAAGCCTCAAGCAGGAATGGGGAGATGAGATATATTTAGCTGTTGTTACAGCCTTAAAAGAAATATATGAGTACAATCCAAGCGGTGGGTATACTGTTGTGGAGCTATGGAACTTCAAGGAAAAAAGAAAGGCTACATTGAAAGAAGTTATCTCTTATATTTTGGATCATATCAAGCCGCTTAAGCGCAAGAGAGGATAG 2148 0.3976 MIACVSGGCRGFAIALIRLYHCDSVIIKEAAWDKGKGGEMKGIGNRLVYFGLLYWLYSFREDVMEFQGRPLFACFTVLFTQGRTSMDYSSEEDSDISESEIYEYSEKPYELLRAGEYKVKNLNGTLRCPYCAGKKKQDYKYKDLLQHASGVGKGSANRSAKQKANHLALAKYLENDLASEAEPIQHPALPLAVNQPSSQEDLFYVWPWTGIIVNIKGKPIDSGHWLKEFSKFRPIHFHIFFKDGDMTAQGVIDFNNDWNGFINASEFEKSFETARHGKKDWNTRELEAGSNIYGWVAREDDYNCGGPIGEYLRNKGRLRTVSDIVQEASESRNSIVTNLTNEIEITNENLDKMQSKFNEKTMSLSRMLDEKDKLHNAFEEESRNMQRRARNEVRRILDEQEKLSSELEEKRRKLDSWSRDLNKREVLTDQERQKLAEEKKKKDLRNESLLLASKEQKIADENVLRLVEEQKREKEEAYNKILQLEKQLDAKQKLEMEIEELKGKLQVMKHLGDEDDTAVQNKIKEMNDELQEKVDNLENLEAMNQTLVVKERQSNDELQEARKELIKGLEDMLNGPRITIGLKRMGELDQKVFVTNCKKIFSPEEAGTKGVELCSLWQENVKNSAWHPFKVITVNDKAENIIDEDDDQLRSLKQEWGDEIYLAVVTALKEIYEYNPSGGYTVVELWNFKEKRKATLKEVISYILDHIKPLKRKRG 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02474 715 Coils Coil 520 564 - -
Spst4g02474 715 Coils Coil 336 356 - -
Spst4g02474 715 Coils Coil 427 447 - -
Spst4g02474 715 Coils Coil 635 655 - -
Spst4g02474 715 Coils Coil 464 511 - -
Spst4g02474 715 Gene3D XS domain 197 358 IPR038588 -
Spst4g02474 715 Pfam XH domain 583 713 IPR005379 -
Spst4g02474 715 PANTHER RIBONUCLEASE P SUBUNIT P38 88 714 IPR045177 GO:0080188
Spst4g02474 715 Pfam XS domain 204 303 IPR005380 GO:0031047
Spst4g02474 715 Coils Coil 368 420 - -
Spst4g02474 715 Pfam XS zinc finger domain 128 170 IPR005381 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02474 Spst-Chr4 64995307 65001319 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02474 - - pvu:PHAVU_010G160300g 1088.17