Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02472 ATGGAGGTTCCAAGTTCCTGGGATGCTCTTCGCAAGCAGGCAAGAAAACTTGAAGCTCAGTTGGATGAGCAGATGAATTCCTATCGTAAATTGGTTTCTGCTAATGTTTCTACAAAAGGTGATGCTTCAGAGAGTGATCTAGAGTCTTGGATTGAGCGATTACTAAAACAACTCCAACAAGTAAATGCACAGATGCAAGCTTGGGTGTCATCTGGTGGTTCGGAAATGGTTTCTCATACTTTGACTAGACACCAAGAAATTCTTCAAGATCTCACGCAGGAATTTTATCGTCTTCGTACTAGTCTTCGTTCTAAGCAAGAACATGCTTCACTGCTAGAAGATTTTAAAGAATTTGATCGGTCAAGATTAGATTTGGAACAGGGTGTAGACACTGAACAACATGCACTCCTAAAAGAGCGTGCATCTATAAGCCGAAGTACAGGACATATGGACAATGTTATATCACAAGCACAAGCAACATTAGGAGCACTTGTCTTCCAACGATCAACATTTGGCGGTATCAATTTGAAGCTTGGCAACATGAGCAGTCGTCTTCCAACGGTAAATAACATCCTTTCGGCAATAAAGAGGAAAAAGTCAATGGATACCATTATACTCTCCCTTGTTGCAGCCGTATGCACATTTCTCATTTTCATCTACTGGCTATCCAAGTGA 675 0.4104 MEVPSSWDALRKQARKLEAQLDEQMNSYRKLVSANVSTKGDASESDLESWIERLLKQLQQVNAQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRTSLRSKQEHASLLEDFKEFDRSRLDLEQGVDTEQHALLKERASISRSTGHMDNVISQAQATLGALVFQRSTFGGINLKLGNMSSRLPTVNNILSAIKRKKSMDTIILSLVAAVCTFLIFIYWLSK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02472 224 Coils Coil 7 34 - -
Spst4g02472 224 Pfam Snare region anchored in the vesicle membrane C-terminus 135 199 - -
Spst4g02472 224 PIRSF Golgi_SNARE 1 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Spst4g02472 224 Coils Coil 51 71 - -
Spst4g02472 224 PANTHER GOS-28 SNARE- RELATED 4 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02472 Spst-Chr4 64982845 64986990 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02472 K08495 - gmx:100797885 404.06