Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02467 ATGCTGTGCAGAAAGAGCTCCAGAAACGGCGTCGCTTCGGGATCGGTCCCGGTGTACCTCAACGTATACGATCTGACACCTATGAACGGTTACGCTTACTGGTTTGGCCTCGGAGTGTACCATTCCGGCGTGCAAGTTCACGGCGTTGAATTCGCGTTCGGGGCTCACGAGTTCCCGTCGACGGGGATATTCGAAGGGGAACCGAAGAGGTGCGAAGGTTTCACATTCAGAAAAACGATTCTTATCGGAAAAACCGATATGGGACCCGGCGAGGTGAAGGCGGTGATGGAAGAACTCGCCGCTGAATACAGAGGGAATGCTTACAATCTCATCACAAAGAATTGCAACCATTTCTGCAACGATGCTTGTCTAAGACTCACCGGAAATCCTATCCCAAGTTGGGTCAATCGTCTTGCCAGAATCGGATTTTTGTGCAACTGTGTTCTGCCTGTGACATTGAACTCAACGAAAGTTAGACATCACAGGATGGAAGAGAAGCAATGTGAGGGTGAGGGAGAGAAGGAAGCATTAGCGAGTGAGGGAAAGAAGCAGAGTGCATCGAATTCCACACCGTCACCATCCCCTGCGAGAGGGCGCAGGGGAAGGAGTAGAACCCGACGTCCCCTCCCTCCTCCTTCGCCGTTGATTATTGGCTCTTCTTCTTCTTCTTCATGA 675 0.5141 MLCRKSSRNGVASGSVPVYLNVYDLTPMNGYAYWFGLGVYHSGVQVHGVEFAFGAHEFPSTGIFEGEPKRCEGFTFRKTILIGKTDMGPGEVKAVMEELAAEYRGNAYNLITKNCNHFCNDACLRLTGNPIPSWVNRLARIGFLCNCVLPVTLNSTKVRHHRMEEKQCEGEGEKEALASEGKKQSASNSTPSPSPARGRRGRSRTRRPLPPPSPLIIGSSSSSS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02467 224 MobiDBLite consensus disorder prediction 164 180 - -
Spst4g02467 224 Pfam PPPDE putative peptidase domain 17 150 IPR008580 GO:0008233
Spst4g02467 224 MobiDBLite consensus disorder prediction 164 224 - -
Spst4g02467 224 Gene3D PPPDE domains 12 170 IPR042266 -
Spst4g02467 224 SMART DUF862_2a 16 154 IPR008580 GO:0008233
Spst4g02467 224 ProSiteProfiles PPPDE domain profile. 16 153 IPR008580 GO:0008233
Spst4g02467 224 PANTHER DESUMOYLATING ISOPEPTIDASE 15 192 IPR008580 GO:0008233
Spst4g02467 224 MobiDBLite consensus disorder prediction 181 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02467 Spst-Chr4 64964237 64965540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02467 K22763 - gmx:100796813 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02467 4 64964237 64965540 Spst4g02467 4 64964237 64965540 ECH