Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02466 ATGCGACGCTCTTCTGCTTCCAAAAAGACGGGTCAATCCAATTCCACTTCCACCGCCGCCGATCTCTTCCGCTCCGCTTCAAGCAAGGCAAGCACGAAGGAATCTGAACGAATTGATAATCTATTTTATTCATATGCTAATGGGTCTACTGCGATGATTGACCCAGAGGGAATTGAAACACTTTGTGCTGATATGGAGGTGGATCATACAGATGTGAGGGTTTTGATGCTTGCATGGAAAATGAAAGCTGAGGAGCAAGGGTATTTTACCTTGGACGAGTGGAGGAGAGGCTTAAAAGCATTAAGGGCCGATACTGTAAGTAAATTGAAGAAGGCACTTCCAGACCTAGAAAAAGAGGTCAGGAGGCCATCAAACTTTGCAGATTTCTATTCATATGCTTTCCAATATTGTTTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATTTGTGAGTTACTTACTCTTGTTTTGGGTTCAACGTTTCCGCCGCAAGTAAACTTATTTGTGGAATATTTGAAGACTCAAAATGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCCGCTTTTGCAACGAGATAAGTTTTCCAACCCTTAATGACTATGATCCTGAGCTTGCATGGCCCTTGATCCTGGACAATTTCGTTGAATGGATTAGAGAAAAGCAAATATAA 687 0.4119 MRRSSASKKTGQSNSTSTAADLFRSASSKASTKESERIDNLFYSYANGSTAMIDPEGIETLCADMEVDHTDVRVLMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFADFYSYAFQYCLTEEKQKSIDIESICELLTLVLGSTFPPQVNLFVEYLKTQNDYKVINMDQWMGFFRFCNEISFPTLNDYDPELAWPLILDNFVEWIREKQI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02466 228 PANTHER RP42 RELATED 7 227 IPR014764 -
Spst4g02466 228 Gene3D - 31 121 - -
Spst4g02466 228 FunFam Defective in cullin neddylation protein 123 228 - -
Spst4g02466 228 Pfam Cullin binding 108 222 IPR005176 -
Spst4g02466 228 MobiDBLite consensus disorder prediction 7 28 - -
Spst4g02466 228 FunFam Defective in cullin neddylation protein 31 121 - -
Spst4g02466 228 Gene3D Cullin, PONY binding domain 123 228 IPR042460 -
Spst4g02466 228 MobiDBLite consensus disorder prediction 1 28 - -
Spst4g02466 228 ProSiteProfiles DCUN1 domain profile. 33 224 IPR005176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02466 Spst-Chr4 64957288 64961361 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02466 K17824 - gmx:100499856 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02466 4 64957288 64961361 Spst4g02466 4 64957288 64961361 ECH