Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02462 ATGTCAGAAGAAGATTTACACTTACCTCGTGAATGCTGGGAATTGGTATTCAAATTCCTCAAACCCAACCTTCACTTCGAACCTCTCTCCCTTGTCTCAACCCAATTCCTCGCCATCACCAACCTCCTCCGAACCTCCCTCACCATATCCAACCCAACACTCCCCTTTCTCCCCAGCCTCTTGCTCAGGTTCCCCTCCCTCACAGCTCTTGACCTTACGCGCCTCCATCATTCCCACCTCCACGCGCTCCTCCTCCAACTCTCAGGCGCCGCCCCACCACTCCTTTCGCTCAACCTCTCCGGCCACCCTTCCCTCCCCTCAAATGGGTTGCGTGCGTTCGCCAGAAAGATCACAACTTTGAAATCCCTCACTTGCTCCCACTTGGGTTCTCTCCAAAACGCCGATCTCCTTCTAATCGCCGACTGTTTCCCTTTCCTCGAACATCTCGACCTCAGTTTCCCCGAAAATACCGACAATTCCGGTGACCCAGTTTCCGATTTAGGCGTAAAGGCTCTCTCTTTGGCCCTAACTAAGCTCCGTAGCGTTAACCTCTCTGGCAATTTCTTCATCAACGACCCTTCCCTTCTCAGTCTCTGCAAAAACTGCGAGCTTCTTGAGGAAATAATAATCTTCGAGTGCCACTTCATCACGCAACGTGGCATCGCTTCCGCGATTCGTGAAAGACCGTGCTTGCGTTCGTTCTGCGTTAGTAATTTCGGGTGTGGAACAAAGAAGGGTGACACTGGCAGACCCTATGCGACTTCTAATTTCATCAATGCGTTGGTGGGATTGAAGGGCTTGACTTGTCTCGATTTGTCGTGTTCTTCTATCTCCGATGAGTTGCTATGTTGTGTTGCGGAGGAAGGGATTCCTTTGAAGAAGCTTGTTTTACAAGGTTGTTGTAACTATAGTTACGTTGGAGTGTTGTGCTTGTTGTCCACATGTCAGTCTGTGGAGCATTTGGACCTTCAAAACGCCGACTTTCTGTGCGATCAGCGTGTGGAAGAGTTGTGTGAGTTTCTTGGGAATTTGGTGTCCATGAATGTCAGTGGTTGTAGGATGTTAACTGATTTAGCTTTGTTTGCACTCGTTAGGAAGTGTCCTTTGTTGAATGAGATCAAAATGGAGGCAACAGATGTTGGGAAGAAGGGGGTTGATGTTGATTTCGTGAATGGTTTTGTGAATCGTCAAGTGAAGTCTCTCTACTTGAGAAGCAATTCCTGGTTGAGGGATGAAAGTGTTGAAACGATTGCTTCTGTTTGCCCCAGTTTGGAGGTGATTGATTTGAGCTCATGCTGTGGCATATCTGAAGGTGTTGTTGAGGTTTTAAGGAGGTGTAGTAAGGTTAGGCATTTGAGCTTGGCCTTTTGTTCAGGAGTGAAGTTAACTGGGTTGAACTTTGAAGTTCCAAAACTAGAAGAGTTGAACTTGTCACGATCAGTAGTTGACGATGAAATGCTTTGTGTGATCTCAAAGTGTTGTCGTTGGTTGCTGCATTTGGACTTGGAAGATTGCTCTGGTGTCACGGCCAATGGAGTTAGGAAAGTGGTGGAGAAATGCACGCGATTGAGAGAAATTAATTTGGTGTCTTGTTGTGAAGTGGAAGCTAGTGTTGTTGCTTGGATGGTGTTTTCCAGGCCATCATTGAGAAGGATAATGGCCCCCCCGAGTTTGGATCATAGTGGTGGCCAGAGGGAACTCCTCTTGCGTCATGGATGCATTGTTAGTGTGTCCTAG 1737 0.4761 MSEEDLHLPRECWELVFKFLKPNLHFEPLSLVSTQFLAITNLLRTSLTISNPTLPFLPSLLLRFPSLTALDLTRLHHSHLHALLLQLSGAAPPLLSLNLSGHPSLPSNGLRAFARKITTLKSLTCSHLGSLQNADLLLIADCFPFLEHLDLSFPENTDNSGDPVSDLGVKALSLALTKLRSVNLSGNFFINDPSLLSLCKNCELLEEIIIFECHFITQRGIASAIRERPCLRSFCVSNFGCGTKKGDTGRPYATSNFINALVGLKGLTCLDLSCSSISDELLCCVAEEGIPLKKLVLQGCCNYSYVGVLCLLSTCQSVEHLDLQNADFLCDQRVEELCEFLGNLVSMNVSGCRMLTDLALFALVRKCPLLNEIKMEATDVGKKGVDVDFVNGFVNRQVKSLYLRSNSWLRDESVETIASVCPSLEVIDLSSCCGISEGVVEVLRRCSKVRHLSLAFCSGVKLTGLNFEVPKLEELNLSRSVVDDEMLCVISKCCRWLLHLDLEDCSGVTANGVRKVVEKCTRLREINLVSCCEVEASVVAWMVFSRPSLRRIMAPPSLDHSGGQRELLLRHGCIVSVS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02462 578 SMART LRR_CC_2 421 445 IPR006553 -
Spst4g02462 578 SMART LRR_CC_2 91 116 IPR006553 -
Spst4g02462 578 SMART LRR_CC_2 202 227 IPR006553 -
Spst4g02462 578 SMART LRR_CC_2 469 493 IPR006553 -
Spst4g02462 578 SMART LRR_CC_2 176 201 IPR006553 -
Spst4g02462 578 SMART LRR_CC_2 494 519 IPR006553 -
Spst4g02462 578 SMART LRR_CC_2 341 366 IPR006553 -
Spst4g02462 578 Gene3D Ribonuclease Inhibitor 394 465 IPR032675 -
Spst4g02462 578 PANTHER UNCHARACTERIZED 266 536 - -
Spst4g02462 578 Gene3D Ribonuclease Inhibitor 466 553 IPR032675 -
Spst4g02462 578 Gene3D Ribonuclease Inhibitor 14 387 IPR032675 -
Spst4g02462 578 FunFam F-box/LRR-repeat protein 20 467 554 - -
Spst4g02462 578 SUPERFAMILY RNI-like 255 541 - -
Spst4g02462 578 SUPERFAMILY RNI-like 9 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02462 Spst-Chr4 64921398 64923134 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02462 K10268 - gmx:100819538 898.656