Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02450 ATGTATAATAAACCTGTACCATACTTGTCTTCTCTAATATCCATCATGTCAAATGATAATTCTAAATCAACCTTTGACGAGCTTCGATGGGTGATTCACATCCGCAAAACCCTTGAAGAAGAGCTTGAGGAAGATGGTGAATTTGCTGTATCCATCTTCAGTGTGCCCAAGCTCCTCATGGCAAGTGATCCACACTCTTACGTCCCTCAACAGGTTGCAATTGGTCCTTACCACTATTGGCGTCCAGAGCTATTTGAGATGCAAAGGTACAAGATTGCAGCAGCAAAAAGATTCCAGAAACGTCTACAAAGCTGCAAGTTGGAGACTCTTGTAGACCAATTGACCAAGTTGGAGGAGAGGGTTCGAGCATGCTACCACAAGTTCTTGGATTTCAACGGGGAAACATTGGTGTGGATGATGACAGTTGATGCCTCATTCTTGCTTGAGTTCCTTCAAGTTTTTGCCATGCAGGAGGGAGAAAAGGTGCAGAGGGTTTCTTCCAGCATGTCCCATTTGGTGGATTATGCTGGGAAGAAATCAGCTCATAATGCAATTTTGAGGGACTTTGTAATGCTTGAGAATCAAATCCCATTGTTTGTGTTGAGAAAGATGCTGGAGTTCAAATTCTCATCGCTTGAAGCTGCTGATGACATGCTGAGCTTGATGTTTATAGGGCTGTTCAAAGAGATTTCTCCTTTCAAGATGATGGAGGAGTATCCGAACATTCAGGTCTCGGAGAGTTTGCATCTGCTAGATTTCTTGTATGATGTGATAGTGCCAAAATTAGAACAACAACCAGACACGACCGAAGCCGAGGTTCAACAAGAAGAACAAAAGGAAGGGAATGAAGAAGGAACCTCAGACTCCAGCCATGTTAAGCAATTATTCAGTGAAATATGGAATCTTCTTTCAAAGTTACACAAAGGGCCAGTAAAATTAATTCAAAAGGTAACTGTATCTAGACCTCTCAAAGTCTTTTCACAATTGCCTTGGAAAATCGCGTCCAACCTTCCAGGACTTAAGCTTCTGAAGAAACCTGTTGAATATTTCATCTCCTCTCAAGAAAAAGGAGATGAAAAGGGAGAAAGTGCGAGTCCAAGCTCCAATAGTTTCATGAACAAGCCACCCTCAGTAGAGGAAATCACTATTCCTTCTGTTACAGACCTCTTCAGTTGTGGTGTTCATTTTGCACCTACTAAGGGAAGCATATCAAACATCAGTTTTGACCCCAAAACACGCACGTTTTACCTTCCCACAATTGCTTTGGACGTTAACACTGAAGTTTTCCTCAGAAACTTGGTTGCATATGAAGCATCAGTTGCATCAGGGCCATTGGTTATAACCCGTTACACTGAGTTGATGAACGGAATTATAGACACGGAGGAAGATGCAAAGATTCTGAGAGAAAAAGGGATCATTCTTAACCACTTGAAAAGTGATAAAGAGGTGGCTAACCTGTGGAATGGAATGAACAAGTCCTTGAGACTGTCAAGGGTCCCAGAATTGGACAAAGTGATTGAGGATGTGAACAAGTATCACAATGGTAGAATGAAGGTAAAAATTTGGAAGTTCATGAAGGCTTACGTGTTTAGTTCTTGGCAGTTTTTGACATTCCTTGCTGCCATATGCCTCTTGCTCTTGATGGCTTTGCAATCTTTCTGCTCTGTCTACACTTGCAATCGTTTTTTACGATCTGCACTAAATTCCAGTGGTTAA 1716 0.4172 MYNKPVPYLSSLISIMSNDNSKSTFDELRWVIHIRKTLEEELEEDGEFAVSIFSVPKLLMASDPHSYVPQQVAIGPYHYWRPELFEMQRYKIAAAKRFQKRLQSCKLETLVDQLTKLEERVRACYHKFLDFNGETLVWMMTVDASFLLEFLQVFAMQEGEKVQRVSSSMSHLVDYAGKKSAHNAILRDFVMLENQIPLFVLRKMLEFKFSSLEAADDMLSLMFIGLFKEISPFKMMEEYPNIQVSESLHLLDFLYDVIVPKLEQQPDTTEAEVQQEEQKEGNEEGTSDSSHVKQLFSEIWNLLSKLHKGPVKLIQKVTVSRPLKVFSQLPWKIASNLPGLKLLKKPVEYFISSQEKGDEKGESASPSSNSFMNKPPSVEEITIPSVTDLFSCGVHFAPTKGSISNISFDPKTRTFYLPTIALDVNTEVFLRNLVAYEASVASGPLVITRYTELMNGIIDTEEDAKILREKGIILNHLKSDKEVANLWNGMNKSLRLSRVPELDKVIEDVNKYHNGRMKVKIWKFMKAYVFSSWQFLTFLAAICLLLLMALQSFCSVYTCNRFLRSALNSSG 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02450 571 Pfam Plant protein of unknown function 52 547 IPR004158 -
Spst4g02450 571 Coils Coil 100 120 - -
Spst4g02450 571 MobiDBLite consensus disorder prediction 266 290 - -
Spst4g02450 571 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 45 556 IPR004158 -
Spst4g02450 571 MobiDBLite consensus disorder prediction 272 287 - -
Spst4g02450 571 MobiDBLite consensus disorder prediction 354 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02450 Spst-Chr4 64843706 64847686 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02450 - - gmx:100779984 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02450 4 64843706 64847686 Spst4g02450 4 64843706 64847686 ECH