Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02447 ATGGATACAAATGATTGGAGAGCTCAACTACCACCTGATTCACGCCAAAGAATTGTCAACAAAATAATGGAGACATTGAAAAAACATCTTCCTGTTTCTGGTCCTGATGGATTGAATGAACTTCGGAAGATTGCTCAAAGGTTTGAAGACAAGATTTTTACTGCTGCAACAAGCCAGCCTGATTATCTACGGAAAATATCTATGAAGATGCTTACAATGGAGACTAAATCCCAAAACACCATGGCTAACAATATGCCACCAAATCAAGTTGGCCCTAGCAATAATCCTCCTGATCAAGGACTTGTTTTGCAGCCTCAAATTCATAATCTTGGGCAACAACATTCTATTCCTTTGCCTAGTCAGATGCAGTCACATCAACAGCTTCTATCTCAAAATGTTCAAAATAATGTTGCATCTCAACCAAACCTTCCACCTGTATCTAGTCTAACCCAGACCCCCAGCCAAAATATAGTCCAAAGCTCCAACATACAGAATATGCCTGGGCAAAATTCAGTTGGGAGCACTATTAGCCAAAATTCCAACTTACAGAATATGTTTCCTGGTTCTCAGAGACAAATGCCAGGAAGGCAGCAGATTGTTCCCCCACAGCAACAGCTGCAATCACAAAATCCACAGCAATTTCTTTACCATCAGCAGCTTTTGAAGCAGAAGCTCCAGCTGCAATCCCAGATGCAGCAGCAACAACAACAAAACCTTATGCAACCAAATCAGTTGCAATCTTCTCAGCAATCCACTAATGTTCAACAGTCAATGCCGTCCATGCCTCAGCAACATTCACAAGTTATAAGGCGTCAACCACCACAGACTATGCATCAGCAACAAACACCAGTCACTCAACCAACACTCTTACCAGCACAGCAGCAACAATTTATGGGGCCTCAGTCAAATACAACAAACATGCAACATGCACAGATGCTTGGGCAACAGAACAATGTTGGTGATATACAGCAACCTCAAAGAATGCTTTCACAGCAAAGTAATCTTACAAACCTGCAACAGCGACAACATCAGGTAATAAATCAGCAGAACAGCCCGGCAAATATTCATCAGCAACAATTGGGAAACAATGGCCCTGGGTTACAGCAGCAGCATTTGCTTGGACCGGAATCTGGCAATGCAGACATGCACACAAGTCATCACTCTGCACACATGCTGCAACATCCAAAGGTTCCAATGCAGCAGCAATCTCAACAAAATACATCAAATTTGTTGCTACCTCATTCACAGCAGTCACAACAGCAATTAATGCCTCAGATTCATACTCAGTCTGCACAGTTGCAACAGCAAATGGGCTTGCATCAACAGCAGCAGCAGCCAAATCCCTCACAACGAGATATGCAGCAAAGAACAGGGTCCTTACTTCAACAACAAAATGTGCTTGATCAACAAAAACAGTTGTATCAATCTCAAAGAACTCTTCCAGAACCATCAGCAAATTCTACAGCACAATCTGCACAATCAAGTGGGAATGATTGGCAAGAAGAAGTTTACCAAAAGCTCCAAACCATGAAAGAAAGTTACTTGCCGGATATGAATGAAATGTACCAAAAAATTGCTAATAAACTTCAGCAGCATGATTCTCTTCCCCAACAGCCAAAATCAGATCAGATTGATAAGCTGAGGGCATATAAATTGATGTTGGAGCGAATGATGGCACTCGTACAGATTCCCAAGATCAACATTTTACCACATTTCAAGGAAAAATTGGGATCATATGAGAAGCAGATTATAAATCTCATAAATTCAAATAGACCCAGGAAAGGCATGTCTTCAGTGCAGCAGGTAGGACAGCTTCCCCCAACTCATATGTCCTCCATGCAACAGCCACAATCCCAAGTTACACAATTACAGTCTCATGAAAATCAAATGAATTCTCAGCTGCCGTCAACAAATTTACAAGGTTCTGTGTCAACCATGCAGCAGAATAATATTGCAAGCTCTCAGCATAATCCTTTGTCTGGCATATCAACAGGACAACAGAAGATGAATTCTATGCAACCTGGAACTAATTTAGATTCTGGACAAGGAAATTCTGTGAATTCCCTTCAACAGGTTCCAATGAGCTCCCTCCAACAAACTTCTGTTAGTACTCCTCAGCAGACTAACATTAATTCCTTACAATCACAAGGTGGGGCGAATATGAGTCAACAAAATTCCCTTCAGTCAGGTTCCAGTGCACTTCAACACCAACTGAAACATCAGCAGGAACAGCAGATGCTGCAGAATCAACAATTCAAACAATATCAGCAGCGACAATTGGTGCAGAGGCAGCTCCTTCAGCAGCAGCAACTGCACCATCCAGCAAAGCCACAGCTATCTTCACAATTGCAGACACATCAAATTACCCAGCTTCATCAAATGAATGATATAAATGATCTAAAAATGCGACAAGGATTGGGTGTTAAGCCAGGGGTCTTTCAGCAACATCTTACATCAGGTCAACACTCAGCGTATTCCCATCAACAGCTGAAACAAGGGAATTCATTTCCTGTTTCTTCACCTCAACTCCTTCAGGCTGCCTCTCCTCAGATTCAGCAACATTCATCTCCCCAGGTTGAGCAACAAAATCATCTCCCATCTAAAACTAAAGTTGCAACTCTTTTGCAATCTTCTAATTCACCCTTTGTGGGACCTACCCCTTCACCTCCTTTGGCTCCATCTCCTATACCAGGAGAATCTGAGAAGCCCTTTCCTTGTGCTTCACCATTATCAAATGCTGCAAATATTGGACATCAACAAGCAGGGGGTGCTACTGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATTTCAGCGTCTCCTTTATTGGCAGAATTCAGTGGTCCAGATGGTGTGCATGGTAATGCTACAGCTGCCACTTCTGGGAAATCAACTATTACAGAGCAGCCTTTTGAACGCCTAATTAATGCGGTGAAATCAATCTCATCTAAAGCATTAAGTGCTGCGGTAAGGGATATGGGTTCAGTTATGAGTATGAATGATAGAATAGCAGGATCAGCTCCAGGTAATGGATCCAGAGCAGCTGTTGGAGAGGATTTGGTTTCCATGACTAATTGTCGTCTTCAAGCTAGAAATTTCATTACTCAAGATGGGTCCAATGGAATTAAGAGGATGAAACGTTACACTAGTGCTATACCCTTGAGTGGTGTATCATCTGCTGGCAGCATGAATGATAGTATCAAGCAGTTAGCTGGTTCAGAGGCTTCTGATCTAGAGTCAACTGCAACATCCAGTGCCAAGAAACGGAAGATTGAGGTTAATCATGCACTTTTGGAAGAAATAAGGGAGATTAATCACCAACTTATTGACACGGTAGTAGACATAAGCAATGTTGATCCAACAGCTGCTGTTGCTGCTGCTGAAGGTGCAGAAGGAATCCTTGTCAAATGCTCTTTCATTGCTGTGGCTCTCAGCCCTAGCTTAAAATCCCAATATGCTTCAGCGCAGATGTCACCTATTCAGCCCCTGCGTTTACTGGTTCCTGCAAATTATCCTACTTGTTCTCCCATACTCCTAGACAAATTTCCAGTTGAATCCAGTAATGAGAATGAAGATCTTTCAGTGAAGGCAAAGGCAAAGTTTAGCACATCTTTGCGGAGTTTATCACAACCTATGTCACTTGGGGATATTGCAAGGACTTGGGATGTTTGTGCTCGCAGTGTTATTTCTGAGCATGCCCAACAGAGTGGAGGAGGAAGCTTCAGCTCTAAGTATGGAACTTGGGAGAATTGTTTGACCACAAACTAA 3771 0.4261 MDTNDWRAQLPPDSRQRIVNKIMETLKKHLPVSGPDGLNELRKIAQRFEDKIFTAATSQPDYLRKISMKMLTMETKSQNTMANNMPPNQVGPSNNPPDQGLVLQPQIHNLGQQHSIPLPSQMQSHQQLLSQNVQNNVASQPNLPPVSSLTQTPSQNIVQSSNIQNMPGQNSVGSTISQNSNLQNMFPGSQRQMPGRQQIVPPQQQLQSQNPQQFLYHQQLLKQKLQLQSQMQQQQQQNLMQPNQLQSSQQSTNVQQSMPSMPQQHSQVIRRQPPQTMHQQQTPVTQPTLLPAQQQQFMGPQSNTTNMQHAQMLGQQNNVGDIQQPQRMLSQQSNLTNLQQRQHQVINQQNSPANIHQQQLGNNGPGLQQQHLLGPESGNADMHTSHHSAHMLQHPKVPMQQQSQQNTSNLLLPHSQQSQQQLMPQIHTQSAQLQQQMGLHQQQQQPNPSQRDMQQRTGSLLQQQNVLDQQKQLYQSQRTLPEPSANSTAQSAQSSGNDWQEEVYQKLQTMKESYLPDMNEMYQKIANKLQQHDSLPQQPKSDQIDKLRAYKLMLERMMALVQIPKINILPHFKEKLGSYEKQIINLINSNRPRKGMSSVQQVGQLPPTHMSSMQQPQSQVTQLQSHENQMNSQLPSTNLQGSVSTMQQNNIASSQHNPLSGISTGQQKMNSMQPGTNLDSGQGNSVNSLQQVPMSSLQQTSVSTPQQTNINSLQSQGGANMSQQNSLQSGSSALQHQLKHQQEQQMLQNQQFKQYQQRQLVQRQLLQQQQLHHPAKPQLSSQLQTHQITQLHQMNDINDLKMRQGLGVKPGVFQQHLTSGQHSAYSHQQLKQGNSFPVSSPQLLQAASPQIQQHSSPQVEQQNHLPSKTKVATLLQSSNSPFVGPTPSPPLAPSPIPGESEKPFPCASPLSNAANIGHQQAGGATAPAQSLAIGTPGISASPLLAEFSGPDGVHGNATAATSGKSTITEQPFERLINAVKSISSKALSAAVRDMGSVMSMNDRIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFITQDGSNGIKRMKRYTSAIPLSGVSSAGSMNDSIKQLAGSEASDLESTATSSAKKRKIEVNHALLEEIREINHQLIDTVVDISNVDPTAAVAAAEGAEGILVKCSFIAVALSPSLKSQYASAQMSPIQPLRLLVPANYPTCSPILLDKFPVESSNENEDLSVKAKAKFSTSLRSLSQPMSLGDIARTWDVCARSVISEHAQQSGGGSFSSKYGTWENCLTTN 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02447 1256 MobiDBLite consensus disorder prediction 476 500 - -
Spst4g02447 1256 MobiDBLite consensus disorder prediction 395 458 - -
Spst4g02447 1256 MobiDBLite consensus disorder prediction 355 386 - -
Spst4g02447 1256 MobiDBLite consensus disorder prediction 608 745 - -
Spst4g02447 1256 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 794 1245 IPR044661 GO:0003713|GO:0031490
Spst4g02447 1256 MobiDBLite consensus disorder prediction 233 284 - -
Spst4g02447 1256 FunFam Mediator of RNA polymerase II transcription subunit 15a 5 83 - -
Spst4g02447 1256 SUPERFAMILY Kix domain of CBP (creb binding protein) 3 79 IPR036529 GO:0003712|GO:0006355
Spst4g02447 1256 MobiDBLite consensus disorder prediction 161 210 - -
Spst4g02447 1256 MobiDBLite consensus disorder prediction 845 882 - -
Spst4g02447 1256 MobiDBLite consensus disorder prediction 883 902 - -
Spst4g02447 1256 Gene3D Coactivator CBP, KIX domain 5 84 IPR036529 GO:0003712|GO:0006355
Spst4g02447 1256 MobiDBLite consensus disorder prediction 82 102 - -
Spst4g02447 1256 Pfam KIX domain 4 83 IPR036546 -
Spst4g02447 1256 Coils Coil 217 237 - -
Spst4g02447 1256 MobiDBLite consensus disorder prediction 355 458 - -
Spst4g02447 1256 MobiDBLite consensus disorder prediction 845 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02447 Spst-Chr4 64817856 64829998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02447 K14972 - gmx:100805336 1769.98