Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02443 ATGGGGGGAGCGTGTTCTAGGAAGCAAGAGCAGGACAATGAAGATAGTCTTACCAGAGGACTATCACGACGATATGGCAAATGTGGGAGTTTGAAATGGTGGACGTCCTCTTTTTCTTGTCCATCTGTTGACTTTCACTTACGAAAAGGAGAATGCCCACCATTGTTGGACTTGTGCATACAGAAAATAAATGAGGATCTTCACTTAGGAGAGTATGACGGGGTTAATGATAATTGGATGGGCGTCATCTCATCCCAGGGATCATCTTTACTTTCTGTAGATCTTTCTGGGTCTGATGTCACTGATTTTGGGCTTACATATCTTAAAGATTGTGAAAGTCTCATTTCCTTAAATCTAAATTACTGTGATCAAATATCTGATCGTGGACTAGAGTGTATTAGTGGCCTGTCAAACTTGACAAGTTTGAGTTTTAGACGAAATGATTCAATTTCTGCTCAAGGAATGAGTGTCTTTTCTGGTCTTGTTAACTTGATCAAGTTGGATTTGGAGAGATGTCCTGGGATTCACGGAGGCCTCGTTCATCTTCGAGGTTTGACCAAGTTGGAATCTCTCAATTTAAAGTGGTGTAATTGCATAACAGATTATGATATGAAACCTCTTTCAGAGCTTGCTAGCCTGAAAAGTCTAGAGATTTCATCAAGTAAAGTCACTGATTTTGGCATGAGTTTCCTGAAAGGGTTACAGAAGCTTGCGCTGTTAAATTTAGAAGGGTGCCTTGTAACAGCTGCTTGCTTGGATTCTCTTGCAGAGCTTCCTGCACTGTCAAACTTGAATCTTAATAGATGCAATCTCTCTGACAATGGATGCAAAAAATTTTCACGACTGGAAAATTTGAAAGTATTAAACTTGGGATTTAATGTCGTAACAGATACATGTTTAATGCACTTGAAAGGATTGACAAAGTTGGAGAGCTTGAACCTTGATTCATGTAAGATTAGTGATGAAGGGTTGGTCAATTTGGCAGGCCATAAGCGATTGAACTGCTTGGAATTGTCTGATACAGAAGTTGGAAGCAATGGGCTACACCATTTATCAGGATTGTCTAATCTGCAGAAAATAAATCTGTCTTTTACCATGGTTAGTGATGGTGGTTTAAGTAAATTGTGTGGACTCTCATCTCTCAAGTCACTTAATTTGGATGCTTACCAAATTACTGATTCTGGGCTGTCAAACCTTAAAAGTTTGACTGGCCTCACTGACCTGGATTTGTTTGGTGCACGAATCACGGATTTCGGTACAAATTATTTGAAAAAATTTAAGAACCTGAGGTCTTTGGAAATATGTGGTGGAGCATTGACTGATGCTGGTGTGAAAAATATCAAAGAGCTTTCTTCTCTGGTCTGCTTAAATTTATCACAAAACAGCAACCTCACAGACAAAACCCTCGACTTAATTTCTGGGCTCACTGGGTTGGTTTCTTTGAATGTTTCAAATTCTCGTATCACCAATGCTGGTCTGCAGCATTTGAAAACACTGAAGAACTTACGATCTCTGACATTGGAATCCTGTAAGGTGACAGCAAATGACATGAAGAAACTGAAATCAATATACCTCCCGAATCTGGTAAGCTTTCGGCCAGAAATTTACAACCTATGGTGTGCTGCTATTTTCTTACTCGGGGAAAGTGAAATTGATCTGATCGACGAAATGGGGGCCCTGGCAGTGTTGGTGCAAAACAGGTGA 1704 0.3996 MGGACSRKQEQDNEDSLTRGLSRRYGKCGSLKWWTSSFSCPSVDFHLRKGECPPLLDLCIQKINEDLHLGEYDGVNDNWMGVISSQGSSLLSVDLSGSDVTDFGLTYLKDCESLISLNLNYCDQISDRGLECISGLSNLTSLSFRRNDSISAQGMSVFSGLVNLIKLDLERCPGIHGGLVHLRGLTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDFGMSFLKGLQKLALLNLEGCLVTAACLDSLAELPALSNLNLNRCNLSDNGCKKFSRLENLKVLNLGFNVVTDTCLMHLKGLTKLESLNLDSCKISDEGLVNLAGHKRLNCLELSDTEVGSNGLHHLSGLSNLQKINLSFTMVSDGGLSKLCGLSSLKSLNLDAYQITDSGLSNLKSLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICGGALTDAGVKNIKELSSLVCLNLSQNSNLTDKTLDLISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCKVTANDMKKLKSIYLPNLVSFRPEIYNLWCAAIFLLGESEIDLIDEMGALAVLVQNR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02443 567 Gene3D Ribonuclease Inhibitor 325 432 IPR032675 -
Spst4g02443 567 FunFam Leucine-rich repeat family protein 177 255 - -
Spst4g02443 567 FunFam Predicted protein 75 176 - -
Spst4g02443 567 Gene3D Ribonuclease Inhibitor 256 324 IPR032675 -
Spst4g02443 567 Pfam Leucine rich repeat 259 319 IPR001611 GO:0005515
Spst4g02443 567 Pfam Leucine rich repeat 428 488 IPR001611 GO:0005515
Spst4g02443 567 Pfam Leucine Rich repeat 111 134 IPR001611 GO:0005515
Spst4g02443 567 Pfam Leucine Rich repeat 186 207 IPR001611 GO:0005515
Spst4g02443 567 Pfam Leucine Rich repeat 137 158 IPR001611 GO:0005515
Spst4g02443 567 FunFam Leucine-rich repeat family protein 431 530 - -
Spst4g02443 567 SMART LRR_CC_2 378 402 IPR006553 -
Spst4g02443 567 SMART LRR_CC_2 111 136 IPR006553 -
Spst4g02443 567 SMART LRR_CC_2 426 450 IPR006553 -
Spst4g02443 567 SMART LRR_CC_2 185 210 IPR006553 -
Spst4g02443 567 SMART LRR_CC_2 475 499 IPR006553 -
Spst4g02443 567 SMART LRR_CC_2 258 282 IPR006553 -
Spst4g02443 567 SMART LRR_CC_2 306 330 IPR006553 -
Spst4g02443 567 PANTHER UNCHARACTERIZED 19 201 - -
Spst4g02443 567 SUPERFAMILY RNI-like 280 525 - -
Spst4g02443 567 SUPERFAMILY RNI-like 73 321 - -
Spst4g02443 567 Gene3D Ribonuclease Inhibitor 59 176 IPR032675 -
Spst4g02443 567 Gene3D Ribonuclease Inhibitor 177 250 IPR032675 -
Spst4g02443 567 Gene3D Ribonuclease Inhibitor 435 529 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02443 Spst-Chr4 64779309 64790179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02443 79 384 Receptor kinase-like Gene Family AT5G51350 27.508 9.91e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02443 - - gmx:100800666 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02443 4 64779309 64790179 Spst4g02443 4 64779309 64790179 ECH