Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02441 ATGATGTCGTCGGAGGAGGACGTGTTCGTTGGCGCCATCGACCAGGGTACGAGCAGCAGCAGGTTCATAATCTACGATGGGACGAGTAAGGTAATCGGGTTGCACCATGTGGAGTTCACACAGTTCTACCCGGAAGCGGGGTGGGTGGAGCACGACCCGATGGAGATCTTGGAGAGTGTCAAGGTGTGCGTGGCCAAGGCCGTCGACAAGGCCACCGCCGATGGCTTCAACGTCGACAAGGGACTCAAGGCCATCGGTCTCACCAATCAGAGAGAAACCACTCTCGTCTGGAGCAAATCCACTGGTCTCCCTCTCTATAACGCCATCGTTTGGATGGATGTTCGCACTTCTTCCATTTGCAGGAGACTGGAAAAGGATTTATCCGGTGGTAGAAACCATTTTGTGGAGAGAAGTGGCTTGCCTATTAGCTCATACTTTAGTGCATTGAAGCTGCTGTGGCTGATGGAAAATGTGGATGATGTGAAGGAGGCTATAAAGAATAAGGATGCGCTGTTTGGAACTATAGACACTTGGCTGATATGGAATTTAACTGGTGGGGTGAAGGGGGGATTGCATGTTACTGATGTTTCAAACGCATCTCGGACATTGCTAATGAATCTAAAAACCCTTGAGTGGGACGAATCTACCTTACAAACCCTTCAAATTCCGGCTGAAATTTTGCCTAAGATTGTTAGCAATTCTGAAGTTATAGGAGAGATTGGAGCTGGGTGGCCAATTGCTGGTATCCCTATTGCGGGATGTTTAGGGGATCAACATGCGGCAATGTTAGGACAAGTATGCCGTAAGGGGGAGGCTAAAAGCACTTATGGCACAGGTGCTTTCATACTACTAAATACTGGTGAAGGGATAGTTCGGTCGTCACATGGTCTTCTCTCCACTATAGCCTTCAAGCTTGGCCCCAAAGCTCCAACAAATTATGCATTGGAAGGGTCAGTTGCTATTGCTGGAGCTGCAGTGCAGTGGCTTAGAGACAGTCTTGGCATCATTTCTAGTGCTTCAGACATAGAGAAACTGGCATTAGAGGTTGAATCCAGTGGTGGGATTTACTTTGTTCCTGCTTTTAATGGATTGTTTGCTCCATGGTGGCGTGAGGATGCTCGCGGTGTTATTGTTGGAATAACAAGGTTTACAAGCAAGGCTCACATTGCTCGAGCCGTGCTTGAGAGCATGTGTTTCCAAGTAAAAGATGTCTTGGATTCAATGCATAAAGATTCAGAACAAGAAGAGTCCTTAAAAAAAGAATTTTTGCTTAGAGTGGATGGTGGGGCAACTGTTAACAACCTGTTGATGCAGATTCAGGCAGATTTAATGGGAGGTCCAGTAATTAGACCTGCTGACATAGAGACAACAGCCCTTGGAGCAGCCTTTGCTGCAGGATTGGCTACTGGGGTTTGGAAAGAAGAAGATGTTTTCAATACTGGGGCGAAGATGAAGAATGCTACAATTTTCCGTCCCATGATGGCTGAGGAAGTAAGGAAAAAGAAAGTTGAATCTTGGTGCAAAGCTGTTAGTAAAACTTTTGACTTAGCTGATCTTGCTTTTTGA 1566 0.4649 MMSSEEDVFVGAIDQGTSSSRFIIYDGTSKVIGLHHVEFTQFYPEAGWVEHDPMEILESVKVCVAKAVDKATADGFNVDKGLKAIGLTNQRETTLVWSKSTGLPLYNAIVWMDVRTSSICRRLEKDLSGGRNHFVERSGLPISSYFSALKLLWLMENVDDVKEAIKNKDALFGTIDTWLIWNLTGGVKGGLHVTDVSNASRTLLMNLKTLEWDESTLQTLQIPAEILPKIVSNSEVIGEIGAGWPIAGIPIAGCLGDQHAAMLGQVCRKGEAKSTYGTGAFILLNTGEGIVRSSHGLLSTIAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGIISSASDIEKLALEVESSGGIYFVPAFNGLFAPWWREDARGVIVGITRFTSKAHIARAVLESMCFQVKDVLDSMHKDSEQEESLKKEFLLRVDGGATVNNLLMQIQADLMGGPVIRPADIETTALGAAFAAGLATGVWKEEDVFNTGAKMKNATIFRPMMAEEVRKKKVESWCKAVSKTFDLADLAF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02441 521 Pfam FGGY family of carbohydrate kinases, C-terminal domain 272 468 IPR018485 GO:0005975|GO:0016301
Spst4g02441 521 SUPERFAMILY Actin-like ATPase domain 10 267 IPR043129 -
Spst4g02441 521 Gene3D - 266 516 - -
Spst4g02441 521 FunFam Glycerol kinase 7 265 - -
Spst4g02441 521 Pfam FGGY family of carbohydrate kinases, N-terminal domain 10 264 IPR018484 GO:0005975|GO:0016301
Spst4g02441 521 FunFam Glycerol kinase 266 516 - -
Spst4g02441 521 PANTHER SUGAR KINASE 9 515 - -
Spst4g02441 521 NCBIfam glycerol kinase GlpK 9 514 IPR005999 GO:0004370|GO:0006072
Spst4g02441 521 SUPERFAMILY Actin-like ATPase domain 267 514 IPR043129 -
Spst4g02441 521 ProSitePatterns FGGY family of carbohydrate kinases signature 2. 375 395 IPR018483 GO:0005975|GO:0016773
Spst4g02441 521 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 145 157 IPR018483 GO:0005975|GO:0016773
Spst4g02441 521 PIRSF GlpK 8 520 IPR000577 GO:0005975|GO:0016301
Spst4g02441 521 Gene3D - 3 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02441 Spst-Chr4 64767782 64770277 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02441 K00864 - gmx:547750 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02441 4 64767782 64770277 Spst4g02441 4 64767782 64770277 ECH