Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02438 ATGAAGGTTAAGATATGCAATGGGAAGGTTATAGAAGTGGTTGGTTCAGAGAAAGGGTTTTACACTGTGGGGAGGCAATCTCTGCACAGCCACACCTTGGTTGATCTTCTCCAACAGCTCAGCCGAGCCTTTGCTAATGCATATGAATCGTTGATGAAAGCCTTTTTGGAACGTAATAAGTTTGGAAATCTTCCATATGGATTCCGAGCAAATACATGGCTTGTCCCTCCCTCTGTAGCTGAGTCTCCTTCAAGCTTTCCTGCATTGCCCACAGAGGATGAAAACTGGGGTGGTAATGGTGGTGGCCAAGGAAAAAATGGCGAATTTGATCTTAGACCATGGGCAACGGATTTTGCGATACTGGCCTCCCTTCCTTGCAAAACTGAGGAGGAGAGAGTGGTCAGGGATAGAAAAGCATTTCTGCTTCACAATCTATTTGTTGATACCTCAATATTTAAGGCTGTTGCGGCTATACAGCATGTCATGGAATCCAACTCAGACATGAAGAGTGAATTGAATTCTTCTCCGGGTTCTATTCTGCATGAAGATCACGTGGGAGACTTATCCATTACAGTCAAACGTGACATACAGGATGGAAATAAAAAGCACAATTCTACACCAGATGAATCCATCGTGCATAAGGAGGATGGACAGAAGAATTTAATCAAAGGATTGACAGCAGATGAAAGTGTAATTGTTCATGATACTTCTTCCTTGACTGTCGTTGTTGTAAACCACTGTGGATATACTGCAACAGTAAAGGTTGTGGGTAATGTGAACATGAGGAAGCCTAAAGTTCGAGACATTGAGATAGATGATCAGCCAGATGGTGGGGCAAATGCTCTCAACATTAACAGTTTGAGGCTACTGCTTCACAAGTCTAGATCTGATTCATTAGAAGGGAATTTATCATCCCTATCAAATTCGGATGACTTAGATGCTTCTAAAAGCCTTGTTCGGAATGTCGTTCAAGAATGCGTAGAAAAGATAAAGGAGGAGCCTAGTGATTCAAAAAAGTCTATTCGATGGGAACTTGGTTCCTGTTGGATGCAGCATTTGCAAAAACAGGAAACATCATCTGATAAGAGTTCCAAAAACAAAGAAGATGGCAATGATATTGAGCAATCTGTTAAAGGTCTTGGAAAGCAATTTAAATTTTTGAAGAAGAGAGAGAGGAAATCAAATAATGTAGCTGGTGCAGATTCTGGAGAGCAAAATGACTCTAGACCTGGAAATGTGAATGATGATGCTGATAAAATTGAGCTGAACAGTGGTGACTCAAGTAACTCTAGTGATTTGGAGAAACTACTTTCTAAAGAAGCATTTTTGCGTCTAAAGGAATCTGAAACTGGTCTTCACATGAAGTCAGTGGATGAGCTTGTCAGCATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGCTATGGACTTTGCATCACTTGAACTTTCTCCAGTGGATGGGCGTACATTGACTGACTTTATGCATTTAAGAGGATTAAAGATGCGATCTTTGGGTCAAGTGGTTAAACTTGCAGAAAATCTTCCTCACATACAATCCCTTTGTATTCATGAGATGATTACTCGAGCTTTCAAGCATCAACTTAAAGCAGTTATTGCGTCTGTCGACAATGTGGCTGATCTATCTGCAGCCATTGCATCAACTCTAAATTTCTTACTTGGTGGGTGTCGAACAGAAGATACTGACCAAAGTTTGAGTGATGACCATAATCTCAGAATTCAATGGCTACGAATGTTTTTGTCCAAAAGATTTGGGTGGACATTAAATGATGAATTTCAACATTTGAGGAAGTTGTCGATTCTCAGAGGGCTATGTCACAAGGTTGGATTGGAATTGTTCCCTAGAGATTATGACATGGATTCCAGTAAGCCCTTTGGGAAAAATGATATTATCAGCCTGGTTCCTGTTTGCAAGCATGCAGGGTGCTCCTCAATAGATGGACGTAATTTATTGGAGTCTTCAAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAACTATGGAACGAAGGCATTAGCTAAAATGATGGTTGTTTGTGGACCCTATCATCGAAATACTGCAAGTGCATATAGTCTTCTAGCTGTGGTTCTCTACCACACTGGAGATTTTAACCAGGCCACCATTTATCAGCAAAAGGCCTTGGATATAAATGAGAGGGAGCTTGGTCTTGATCACCCTGACACTATGAAAAGCTACGGGGATCTTTCTGTTTTTTATTATCGTTTGCAACACATTGAGCTGGCTCTGAAGTATGTTAATCGTGCTCTATTCCTTCTTCACTTTACATGTGGGCTGTCTCATCCAAATACAGCTGCAACATATATAAATGTGGCTATGATGGAAGAGGGTATGGGAAATGTTCATGTGGCTCTCAGATACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCAGATCATATACAGACTGCCGCAAGCTATCACGCCATAGCTATAGCTCTTTCATTGATGGATGCATTTTCTCTGAGTGTGCAACATGAGCAAACTACACTAAAGATACTCCAAGCAAAGCTTGGATTAGAAGACCTTCGTACACAGGATGCTGCGGCATGGCTTGAATATTTTGAATCAAAAGCCATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCAAAGCCTGATGCATCCATTGCAAGTAAAGGCCACCTTAGTGTGTCGGATCTCCTGGATTTTATCAGTCCTGACCCAAAGAGAAGTGATGCTCAGAGGAAACAGAGGCGTGCAAAGATGCTCCCAACAAGTGATAACAACAGTCAAGAACATGAAGATGCAGTAGCTGAGCAGAACATTGTTTTTTATGACTCAAAAGATGCTCCAAGCATGGTAGAAGGGAATATAAAAGAAAACAATGACACACTTGACTCTCGAATACCAAAAGAAAATGGTGATTTCACTAGGTACAGGCCAGAGACAAGTGAAGTTGTTTATGAGGCATCATCGGATGAGGGTTGGCAAGAAGCTAATTCAAAAGGGCGATCAGGAAATGCTGCTAACCGCAAGTTTGGACACAAAAAGCGACCACTTCTATCAAAGCTCAGCATAAATGGTTCTAATAATTACATTTACAGGGAAAGCAATTCTAGGAATGAGATTAATTCACCACAACAAAGAGGAGTTCCTAGAGTAATTTCAGACATGTCATCTCCATCTAGACAACCAAAAGCTCGAACCATAGCTTTGACCGAAGATTCTGTTAATTATCCAACAAAAACTTCTGTGTCTAAAAGTCCATCTCCAGCATCTCTAAGTTCCTTGGCTTCAAAGTGTATATCTTACAAAGAAGTGGCTCTAGCACCACCAGGTACAGTTTTAAAGCCACTGTCGGAAAAGGCTGAGATAGACAAGGTTAATGCTGAAGATGACATATGCAGCAGTCTAGCTGTGACATCGATCAACGAAGGTACGTGCCAAAGTTCTATAGTTAATACAGTTTCTCAGCATGATGAAACAGAAGAAACTCATGAAATTGAACCTCAACAAGAAAATTCTACATTGGAAGTTGAGAAGGTTTCCCTTGCTTCTGATCAGGCAAAACCTACAGAAACCAATGGAAGTAAGCTTTCAGCTGCGGCTAAACCTTTCAATCCAGGAATGTTGTCCATGTCTCACCATTTAAATTCAGTTTCCTTCACTAGCATGTATGATACAGATGTTAGTCAAGGCATGCACGTGGAGCCTGTGCTTCCCCCTGCAGTTGCTAGGGTCCCTTGTGGACCTAGATCGCCTCTATATTATCGAACCAACTATACTTTCCGCATGAAACACGGTTTAACTAAAAGCCAAACCCCTATCAGAGAAAAAAGTGGATTTGTATCTCCAAGAATAATGAATCCACATGCGCCTGAGTTTGTTCCCAGAAGTGCTTCTCAAACAGAAGCCAATGATACCAATTCAAATGTTTCCAATGAGCATAACTCTATATCTGAGATAGGCATGGCAGAAAAAAATAAGCTGGATGAAAATTGTGTTGAAATCAAGGCAAGTTCCACCAAAAACAGTATGTCTGAATCTGAGAAGTCTGAGATAGCAAGGCAGATTTTGCTCAGTTTTCTAGTGAAATCTGTCAAGGAAAATATTGATTCTGTTGATGAATCTAACGATAGTGAAGGAAAATCTGGGAAGTTGGAAAATTGTGATGATGAAATAGCTAAAGACAGTGCTGTCATAAACATTATGTATGGGAATGAAGAAAAAAATAAGACAGTGCCTCATTCCAGTGATAGTGATGAGCAAGAGACATTAGGTGTTAGTGAAAAAAAGAATGGTGATGAAGGGTTTATAGTTGTCTCAAAGAGGAGGAAAAACAGGCAGAAAATGACAAATGGAGTCACAGAATTGTACAACCAACAGTCCATTTGTGCTTCAGTTCGTTGA 4434 0.4055 MKVKICNGKVIEVVGSEKGFYTVGRQSLHSHTLVDLLQQLSRAFANAYESLMKAFLERNKFGNLPYGFRANTWLVPPSVAESPSSFPALPTEDENWGGNGGGQGKNGEFDLRPWATDFAILASLPCKTEEERVVRDRKAFLLHNLFVDTSIFKAVAAIQHVMESNSDMKSELNSSPGSILHEDHVGDLSITVKRDIQDGNKKHNSTPDESIVHKEDGQKNLIKGLTADESVIVHDTSSLTVVVVNHCGYTATVKVVGNVNMRKPKVRDIEIDDQPDGGANALNINSLRLLLHKSRSDSLEGNLSSLSNSDDLDASKSLVRNVVQECVEKIKEEPSDSKKSIRWELGSCWMQHLQKQETSSDKSSKNKEDGNDIEQSVKGLGKQFKFLKKRERKSNNVAGADSGEQNDSRPGNVNDDADKIELNSGDSSNSSDLEKLLSKEAFLRLKESETGLHMKSVDELVSMAHKFYDEVALPKLAMDFASLELSPVDGRTLTDFMHLRGLKMRSLGQVVKLAENLPHIQSLCIHEMITRAFKHQLKAVIASVDNVADLSAAIASTLNFLLGGCRTEDTDQSLSDDHNLRIQWLRMFLSKRFGWTLNDEFQHLRKLSILRGLCHKVGLELFPRDYDMDSSKPFGKNDIISLVPVCKHAGCSSIDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMVVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMDAFSLSVQHEQTTLKILQAKLGLEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFISPDPKRSDAQRKQRRAKMLPTSDNNSQEHEDAVAEQNIVFYDSKDAPSMVEGNIKENNDTLDSRIPKENGDFTRYRPETSEVVYEASSDEGWQEANSKGRSGNAANRKFGHKKRPLLSKLSINGSNNYIYRESNSRNEINSPQQRGVPRVISDMSSPSRQPKARTIALTEDSVNYPTKTSVSKSPSPASLSSLASKCISYKEVALAPPGTVLKPLSEKAEIDKVNAEDDICSSLAVTSINEGTCQSSIVNTVSQHDETEETHEIEPQQENSTLEVEKVSLASDQAKPTETNGSKLSAAAKPFNPGMLSMSHHLNSVSFTSMYDTDVSQGMHVEPVLPPAVARVPCGPRSPLYYRTNYTFRMKHGLTKSQTPIREKSGFVSPRIMNPHAPEFVPRSASQTEANDTNSNVSNEHNSISEIGMAEKNKLDENCVEIKASSTKNSMSESEKSEIARQILLSFLVKSVKENIDSVDESNDSEGKSGKLENCDDEIAKDSAVINIMYGNEEKNKTVPHSSDSDEQETLGVSEKKNGDEGFIVVSKRRKNRQKMTNGVTELYNQQSICASVR 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02438 1477 MobiDBLite consensus disorder prediction 392 431 - -
Spst4g02438 1477 SMART tpr_5 698 731 IPR019734 GO:0005515
Spst4g02438 1477 SMART tpr_5 782 815 IPR019734 GO:0005515
Spst4g02438 1477 SMART tpr_5 740 773 IPR019734 GO:0005515
Spst4g02438 1477 CDD CLU-central 487 628 IPR033646 -
Spst4g02438 1477 ProSiteProfiles Clueless (Clu) domain profile. 92 364 IPR025697 -
Spst4g02438 1477 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1194 IPR027523 GO:0006996
Spst4g02438 1477 MobiDBLite consensus disorder prediction 354 374 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 969 985 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 1307 1323 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 1296 1323 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 1167 1182 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 997 1024 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 1416 1440 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 1164 1184 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 1045 1075 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 966 985 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 1420 1440 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 911 943 - -
Spst4g02438 1477 Pfam Tetratricopeptide repeat 697 767 - -
Spst4g02438 1477 Pfam Tetratricopeptide repeat 781 855 - -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 913 930 - -
Spst4g02438 1477 ProSiteProfiles TPR repeat profile. 698 731 IPR019734 GO:0005515
Spst4g02438 1477 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 653 903 - -
Spst4g02438 1477 Pfam Translation initiation factor eIF3 subunit 135 485 627 IPR033646 -
Spst4g02438 1477 MobiDBLite consensus disorder prediction 358 374 - -
Spst4g02438 1477 Gene3D Tetratricopeptide repeat domain 657 903 IPR011990 GO:0005515
Spst4g02438 1477 SUPERFAMILY TPR-like 664 817 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02438 Spst-Chr4 64748364 64755363 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02438 K03255 - gmx:100784276 2459.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02438 4 64748364 64755363 Spst4g02438 4 64748364 64755363 ECH