Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02420 ATGGAGAGCGAAACTCAAAGTGCAGGCAAAGATGAGGTCTTTTCGGTTGAACTTTCAGCTCCTTCTGCTTGGAAGAAACTGTTCTTTCCTAAGAAAGTAGGAACTCCAAGGAAAAGTGAGATTGTGTTCATAGCCCCTACTGGGGAAGAAATCACTTCCAAAAAGCAATTGGAGCAGTACCTAAAGGCACATCCTGGGAATCCTCCAATCTCGGAGTTTGACTGGGGAACTGGTGAGACCCCTAGGCGATCAGCAAGGATTAGTGAGAAGGTCAAATTGACTTCACCGGCGGAGACTGAGCCTCCAAGGAAACGATCCCGGAAATCATCAGGTTCATCAAAGAGGGATAACAAAGAAAACGAACCCGCAGATGAAGAATCCAAGCCAGATCCAGATGGAACTGATAACAACAACAAAACAAAGGCTGATACAGAGGAGATTAATAACAGTACTGTTGAAGTGCAGAATGCAACAGCTGAAAAGCCTGAGGGAGGAGAAGAAGCATTGTTAGTAGAATCACGGGAGAAATTTGCTGGGGAAGCTTTGAATGCAGAAGTCACTGAAAAACCCCAACAGGAGGAGATCACTGAAAAGCCCCAAGAGGAGGAGGTCACTGAAAAGCCCCAGGAGCAGGAGGTTGCTGAAAAATCCCAGGAGCAGGAGGGTGCTGCAAAGCCCCAGGAGCAGGAGGTTGCTGAGAACCCCCAAGAGGAGGAGGCACCAATTGCATCAGGAAAAGAAAATGGCACAGTTGATGACAGTAAGCAGGACATAGCAGATACTGTGATTCCTGAGACAAATGGAGGAGCTGAGAAAGTGAACCTGAACCCAGATGTTGAAGAGAATAACAATGCAAAAGAAATCCCATTAAGTGATGGAAAAGACAACATTCAAGCTGAGGAGCAAGTAAATAAAATGGTGGACAATGGACAAGTTATTTGGAGCTGTGCTCAGTGA 957 0.4608 MESETQSAGKDEVFSVELSAPSAWKKLFFPKKVGTPRKSEIVFIAPTGEEITSKKQLEQYLKAHPGNPPISEFDWGTGETPRRSARISEKVKLTSPAETEPPRKRSRKSSGSSKRDNKENEPADEESKPDPDGTDNNNKTKADTEEINNSTVEVQNATAEKPEGGEEALLVESREKFAGEALNAEVTEKPQQEEITEKPQEEEVTEKPQEQEVAEKSQEQEGAAKPQEQEVAENPQEEEAPIASGKENGTVDDSKQDIADTVIPETNGGAEKVNLNPDVEENNNAKEIPLSDGKDNIQAEEQVNKMVDNGQVIWSCAQ 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02420 318 MobiDBLite consensus disorder prediction 61 295 - -
Spst4g02420 318 MobiDBLite consensus disorder prediction 165 182 - -
Spst4g02420 318 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 10 80 IPR001739 GO:0003677
Spst4g02420 318 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 7 292 IPR039622 -
Spst4g02420 318 MobiDBLite consensus disorder prediction 143 157 - -
Spst4g02420 318 Gene3D - 11 85 - -
Spst4g02420 318 MobiDBLite consensus disorder prediction 190 223 - -
Spst4g02420 318 SUPERFAMILY DNA-binding domain 6 104 IPR016177 GO:0003677
Spst4g02420 318 MobiDBLite consensus disorder prediction 96 142 - -
Spst4g02420 318 Pfam Methyl-CpG binding domain 19 79 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02420 Spst-Chr4 64610209 64613026 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02420 - - vun:114166886 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02420 4 64610209 64613026 Spst4g02420 4 64610209 64613026 ECH