Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02416 ATGGCTTTGGCACGTTTGGCTTTGAAAAATTTGCATCAAAGAGTGTGTGCTTCTTCTTCCTTGACTGGCCATGGTTGTAGTGGTGTGAACAAGCAGAGGTGGAACAATGAATTGCTCAAAAGGTTTGCCACCGCAGCAGGGGATAAAGGAAAATCTGAAGGCACTGAAATTGCTGTCACTGAAGGGAAAAAGTCTAATAGATTGTTCCCCAGGAGGAGGGGCAGAAGATGGATTTGGAGAAACAACAATCGTGACTTCTCTCCTGCCCTTTATGAGTTCTTTCCTTCAGGGCTTGGGAACGCACTGATGCAGGCAACTGAGAACATCAACAGGGTGTTTGAGAGCATGAACCTGACACCTTGGTCTCTGAGTGGTAGTGTGAAAGAGAGGGATGACCATTACAAACTAAGGTATGAGATGCCAGGGATGGCAAAAGAGGAGGTGAAGATCACCATTGATGATGGGGTGTTGACAATAAAGGGAGAACACAAGGAAGAGAAAGAGGAAGGTGAGGATGATGAGCATTGGTCATCAAGTAGCTATGGATACTACAACACAAGCTTGGTTTTGCCTGATGATGCCAAAGCTGATGATATCAAGGCAGAGTTAAAGGACGGTGTCCTAACTGTTACCATTCCTAGGACTGAGAAGCCCAAAAAGGATGTAAAACAAGTCACAGTAGAATGA 687 0.4512 MALARLALKNLHQRVCASSSLTGHGCSGVNKQRWNNELLKRFATAAGDKGKSEGTEIAVTEGKKSNRLFPRRRGRRWIWRNNNRDFSPALYEFFPSGLGNALMQATENINRVFESMNLTPWSLSGSVKERDDHYKLRYEMPGMAKEEVKITIDDGVLTIKGEHKEEKEEGEDDEHWSSSSYGYYNTSLVLPDDAKADDIKAELKDGVLTVTIPRTEKPKKDVKQVTVE 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02416 228 MobiDBLite consensus disorder prediction 160 179 - -
Spst4g02416 228 Gene3D - 79 228 IPR008978 -
Spst4g02416 228 Pfam Hsp20/alpha crystallin family 127 227 IPR002068 -
Spst4g02416 228 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 227 IPR044587 GO:0009408
Spst4g02416 228 MobiDBLite consensus disorder prediction 160 176 - -
Spst4g02416 228 CDD ACD_sHsps-like 127 214 - -
Spst4g02416 228 FunFam 26.5 kDa heat shock protein, mitochondrial 91 227 - -
Spst4g02416 228 SUPERFAMILY HSP20-like chaperones 112 227 IPR008978 -
Spst4g02416 228 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 112 228 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02416 Spst-Chr4 64584888 64585961 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02416 K13993 - gmx:100787482 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02416 4 64584888 64585961 Spst4g02416 4 64584888 64585961 ECH