Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02409 ATGGATGGGAACCAAATTTCCACCGTCATTCATTCGTCGTGCAACCGCAGGGATCTACACATCGTCATTACCGGTTCTGTGAAATCAAATGGTCGTTATCTCTGTAAAACCTGTCTTCATCCTCCTCCTCGTCTCGCTCTCACTCTTCTTCCTTTTCGCGCTGCTTTCGCCTCCTTCCCTTTTCTCCCAAAATCTTATTTCTGGGGAACCCTCACTGTATGTTGCTCACAATTTCAATACCCTTTTTCTTTATGCCTATGCCTTGAATCCGCTATAAAGCTTTCAACTTGGCAGCTGGGCACCTTCAAATTTTGGACTAATGGGGAGGTGGATATATGGAATGTTCGGAGACTCGTGGAGTGGAGACCTTGCAATTGGTGGCTACAAGGCCATCAAACAGCTCTACCATTGGAAACCAACGGATATATCAGAGTGGATTGCTATGGGGGCCTCAATCAGATGCGAAGAGATTTCTGTGACGGTGTGGGCATTGCTCGTCTGTTAAATGCAACCCTCGTCCTGCCAAAGTTTGAAGTGGCGTCATATTGGAATGAAACAAGCGGTTTTGCAGATGTATATGATGTAGACTATTTTATAGAGCATATGAATGGCTTTGTCAAAGTTGTGAAAGAGTTACCACCAGAGGTTGCATCAAAAGAACCTGTTCATGTGGACTGTAGCAAACGGAAAGGGCAATTTGATTACGTTGAAAGTGTTCTTCCATCTTTGTTAAAACACAAGTACATTTCAATCACACCAGCAATGTCTCAAAGAAGGGACAGATACCCTTTGTATGCAAAAGCTGCTCTCTGTCAAGCATGTTACAAAGCATTGCGTCTTTCCAGATCCTTGGAAGTGAAAGCCTCTCAGCTTCTAGATGCAATACCTAAACCCTTTTTGTCTCTTCATCTTCGTTTTGAGCCGGACATGGTTGCATACAGCCAGTGTGAGTATCGGGGCCTTTCTCCGGCTTCCATGAAAGCCATAGAGGCAGCACAAGTGGACAGGAAACCATGGACGGGAGACTTGGCCCGCATGTGGAGACTACGTGGGAAATGTCCACTTACCCCTAATGAGACGGCTTTAATACTTGAATCTCTTTCCATCCCGCCAACTACAAATATATACCTAGCAGCTGGAGATGGTTTAATGGAAATTGAAGGATTTACAGAAACCTATACTAACATAGTTACTAAGTCAAGTCTTCTTAGTAGAGAAGACTTCACAAACATGCATGGCAATACAAAAGCTGCTTTGGATTATTATGTATCTATTAACAGTGATTCTTACGTAGCTACATATTTTGGGAACATGGATAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGTTTGTACAAGACTCTATTTTTGAGCAGAAGAGATTTTTCAGAATTAACCTCAAAGGGTCTCAGGGGAAAGGAGTTGATGGAAGCACTCTGGAAGGTTCACAGAGATGATTTTGCTCTAGGAAGAGGATCTGCTCTACCCGAGTGTTTTTGCGAATTCAAGTTGTGA 1515 0.433 MDGNQISTVIHSSCNRRDLHIVITGSVKSNGRYLCKTCLHPPPRLALTLLPFRAAFASFPFLPKSYFWGTLTVCCSQFQYPFSLCLCLESAIKLSTWQLGTFKFWTNGEVDIWNVRRLVEWRPCNWWLQGHQTALPLETNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEVASYWNETSGFADVYDVDYFIEHMNGFVKVVKELPPEVASKEPVHVDCSKRKGQFDYVESVLPSLLKHKYISITPAMSQRRDRYPLYAKAALCQACYKALRLSRSLEVKASQLLDAIPKPFLSLHLRFEPDMVAYSQCEYRGLSPASMKAIEAAQVDRKPWTGDLARMWRLRGKCPLTPNETALILESLSIPPTTNIYLAAGDGLMEIEGFTETYTNIVTKSSLLSREDFTNMHGNTKAALDYYVSINSDSYVATYFGNMDKMVAAMRAFKGLYKTLFLSRRDFSELTSKGLRGKELMEALWKVHRDDFALGRGSALPECFCEFKL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02409 504 PANTHER OS02G0726500 PROTEIN-RELATED 95 489 - -
Spst4g02409 504 CDD O-FucT_plant 142 454 IPR024709 -
Spst4g02409 504 Pfam GDP-fucose protein O-fucosyltransferase 142 448 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02409 Spst-Chr4 64538281 64542458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02409 136 484 Miscellaneous Gene Families AT1G22460 34.426 2.55e-58 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02409 - - gmx:100801207 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02409 4 64538281 64542458 Spst4g02409 4 64538281 64542458 ECH