Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02406 ATGGTGCCTGAAGTTCTTGATGAAGGCATCAGCACTGGCGTTGATGTCTTCAGTAGCCATGTTCTCTACTTTCTTTGCATGTGTCTCTTTCTTCTCTTCCTTTCCATGATCCTTTGGAAAACTTTCATGATGATTCATGTAGCTCCTTCCCATTGTTGTTGCTTGCTTCTCACAACCCATGAACACTCCCTTGAGGTGGTTGGTGGTGAAGATTTGCATTACAATCTGCACAAAGCGAGAAAAAAGGGCATGGAAGCCTTGCACTTGCACCGCGTGCTTCGCATGGTTGTTCCCCAAAACTTCATCTTTTTGCGCTCAATAGCCACCCCATTATCCACAATTCCCATTGCAAGGCCACCATTACGTTGGATCTCAGTATCCTCCCAAACTTGCAGTGCCAGAGCAGGGTGGTTTTTGGGTCTTGGAGCAGATAACAAGAAGACAAATTTACCTGACATCGTCAAAGCCGGTGACCCTGTTCTGCACGAGCCCGCCCGGGAAGTTGATCCCAACGAGATAAAGTCGGAGAAAGTGCAGAAGATCATTGATGACATGGTTCGGGTCATGAGGAATGCTCCTGGAGTTGGTCTAGCTGCTCCCCAGATTGGAATTCCTTTCAGGATAATTGTTTTGGAAGATACCAAAGAGTTTATTAGTTATGTCTCGAAGGAAGAGGCTAAAGTCCAAGATAGAAGACCTTTTGATCTTCTGGTCATCCTAAACCCCAAGCTAGAGAAGAAGAGCAAGAAGACTGCTCTATTTTTTGAAGGATGCTTGAGTGTTGATGGGTTTAGAGCAGTGGTGGAGCGATCCCTTGACGTTGAGGTTACTGGTTTGGATCGCAATGGTACGCCAATCAAAATAAAGGCTTCTGGCTGGCAGGCCCGGATTTTACAACATGAGTGTGATCACTTGGATGGAACTCTGTATGTTGATAAGATGATACCTAGAACTTTCAGAACTGTGGACAACCTGGACCTGCCTCTTGCTCAGGGGTGCCCCAAACTTGGTCCTCGTTAA 1020 0.4627 MVPEVLDEGISTGVDVFSSHVLYFLCMCLFLLFLSMILWKTFMMIHVAPSHCCCLLLTTHEHSLEVVGGEDLHYNLHKARKKGMEALHLHRVLRMVVPQNFIFLRSIATPLSTIPIARPPLRWISVSSQTCSARAGWFLGLGADNKKTNLPDIVKAGDPVLHEPAREVDPNEIKSEKVQKIIDDMVRVMRNAPGVGLAAPQIGIPFRIIVLEDTKEFISYVSKEEAKVQDRRPFDLLVILNPKLEKKSKKTALFFEGCLSVDGFRAVVERSLDVEVTGLDRNGTPIKIKASGWQARILQHECDHLDGTLYVDKMIPRTFRTVDNLDLPLAQGCPKLGPR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02406 339 Gene3D Peptide deformylase 148 338 IPR036821 -
Spst4g02406 339 FunFam Peptide deformylase 150 333 - -
Spst4g02406 339 PANTHER PEPTIDE DEFORMYLASE 145 333 IPR023635 GO:0042586
Spst4g02406 339 Pfam Polypeptide deformylase 152 316 IPR023635 GO:0042586
Spst4g02406 339 Hamap Peptide deformylase [def]. 149 325 IPR023635 GO:0042586
Spst4g02406 339 PRINTS Peptide deformylase signature 256 267 IPR023635 GO:0042586
Spst4g02406 339 PRINTS Peptide deformylase signature 183 212 IPR023635 GO:0042586
Spst4g02406 339 PRINTS Peptide deformylase signature 268 286 IPR023635 GO:0042586
Spst4g02406 339 PRINTS Peptide deformylase signature 287 316 IPR023635 GO:0042586
Spst4g02406 339 CDD Pep_deformylase 153 310 IPR023635 GO:0042586
Spst4g02406 339 SUPERFAMILY Peptide deformylase 149 321 IPR036821 -
Spst4g02406 339 NCBIfam peptide deformylase 152 316 IPR023635 GO:0042586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02406 K01462 - gmx:100784292 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02406 4 64524048 64529754 Spst4g02406 4 64524048 64529754 ECH