Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02404 ATGTCAATGTGGAGCAACCTACCCTTGGATCTCTTAGCCAAAATCTTCTCCTTTCTCTCCCCAGACTCACTAGCCATAGCAAGATCAGTTTGCAAGAATTGGCACACTTGTTCCAAGGCATATCCTATAGCCTCAACATCTGCAACAACAACAACCTCTTCATGGTTCTTGGCTCTTCCAACTCGCAACCATAGACCCTGTTGTTGTTATGCTCACAATCCAACCATAGACAAATGGCACCAACTCTCTCTACCACTCCCATCAATTCGACCAATTGCTTCAATTGGGGGTCTTCTCCTCTTAAAGGTCATCAATTCCACAACCCTCCAATTGGGTCTTTGCAACCCCTTCACGGGCGAGTTCAAGCACCTTCCCCGGTTGCATGCTGCAAGGACCAACCCTGCCATTGGAGTCACACTGTCGAATTCGAATTCATCTCAGGATGATGTTCGGTTGCCTTCGTTTAAAGTTTACGTGGCAGGTGGCATGTCGGAGGCAGCACAAGGTGGCGCCACGTATGAAACCAAGGTGGAGATGTACGACTCAAGGGTTGACACGTGGCAGGTGGTGGGTTCGACCCCTGTGGAAATCGCCGTTAGGCTCACCGTGTGGACACCCAATGAGAGTGTGTGCATTGGAGAGAGATTGTATTGGGTAACCTCGGCCAGAGCCTATACTGTTATGGGATACGACGTTGGTCGAAATGGGTGGAGGGAATTGGGTGTGCCTATGGCTGAGAGGCTAGAGTTTGCCACGCTTGTTAAGAGAAATGGGGCATTGGGATTAGTGGGTGGCACGTGTGGGGGGAGTGGTTCCATTTGGGAGCTTAGTGAAGGTGATAAGTGGTGCTTGGTGGAGAAGGTGCCACTTGAATTAGGGTTGAAATTGTTGGGAGGGAAGAGAGTTTGGGAGAGTGTAAAGTGTGTGGGTAATGAGGATTGTATTTGTTTGTACAAGAATTTTGGAAATGGAATGGTGGTTTGCAAAAGGGTAGGAGTTATGGGTAGGTGGGAATGGATTTGGGTTGATGGGTGTCATTACATCAAGGGAAAACAATTGCCCCATTGTCCAATTAGAGGGGCACTTCTTCATCCAACTCTTGCTTCTTCTCTTATCTATTAA 1122 0.4822 MSMWSNLPLDLLAKIFSFLSPDSLAIARSVCKNWHTCSKAYPIASTSATTTTSSWFLALPTRNHRPCCCYAHNPTIDKWHQLSLPLPSIRPIASIGGLLLLKVINSTTLQLGLCNPFTGEFKHLPRLHAARTNPAIGVTLSNSNSSQDDVRLPSFKVYVAGGMSEAAQGGATYETKVEMYDSRVDTWQVVGSTPVEIAVRLTVWTPNESVCIGERLYWVTSARAYTVMGYDVGRNGWRELGVPMAERLEFATLVKRNGALGLVGGTCGGSGSIWELSEGDKWCLVEKVPLELGLKLLGGKRVWESVKCVGNEDCICLYKNFGNGMVVCKRVGVMGRWEWIWVDGCHYIKGKQLPHCPIRGALLHPTLASSLIY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02404 373 ProSiteProfiles F-box domain profile. 1 36 IPR001810 GO:0005515
Spst4g02404 373 SUPERFAMILY Kelch motif 66 291 IPR015915 GO:0005515
Spst4g02404 373 SMART fbox_2 7 46 IPR001810 GO:0005515
Spst4g02404 373 PANTHER BNACNNG10540D PROTEIN 2 334 - -
Spst4g02404 373 Gene3D - 43 318 IPR015915 GO:0005515
Spst4g02404 373 CDD F-box_SF 5 39 - -
Spst4g02404 373 Pfam F-box domain 4 39 IPR001810 GO:0005515
Spst4g02404 373 Pfam Kelch motif 156 192 IPR006652 GO:0005515
Spst4g02404 373 SUPERFAMILY F-box domain 1 80 IPR036047 GO:0005515
Spst4g02404 373 Gene3D - 4 42 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02404 - - gmx:100783227 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02404 4 64518132 64519253 Spst4g02404 4 64518132 64519253 ECH