Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02402 ATGGCGTTCTCTTCCACTGCAACCGCAACCATTCTGCCGCGTAGCCTCGCCTTCGCTTCTTCCACCAAACTCTTCGTCGGTCAATCTCTTCTTCGTTCTTCTTCTCCGCGCTTCCTCTCGTTCCCCACTCCGAAAACAAACCCTCGCAATCGCCTCATCGTTTCTCTCCAATCCCCACGCGCCCACTCCAGCGCGTCCCCATCTACCTCCGCCACCTTCCACGGCCTCTGCTACGTCGTCGGCGACAATATCGACACCGACCAGATCATCCCCGCGGAATACCTCACCCTTGTCCCTTCCAAGCCCGACGAGTACGAGAAACTCGGCTCCTACGCCCTCGTTGGCCTCCCTGCCTCCTATGCCACGCGGTTCGTCGAGCCTGGCGAGATCAAGACCAAGTACGCCATCGTCATTGGCGGCGCCAACTTCGGCTGCGGCTCCTCCCGCGAGCACGCGCCCGTCGCGCTGGGCGCTTCCGGCGTCTCCGCCGTGGTCGCGGAGTCGTACGCGCGGATCTTCTTCCGGAACTCGGTGGCCACCGGTGAGGTGTACCCGCTGGAGTCTGAGAGCCGTCTCTGCGATGAGTGCACCACCGGCGATGTTGTCACGATCGAGCTCGGAGGGAGCCGCTTGATCAATCACACCACCGGAAAGGAGTATCGGTTGAAGCCGATTGGCGATGCAGGTCCGGTGATTGAGGCTGGTGGCATCTTTGCCTACGCGAGGAACACCGGCATGATTCCCTCTAATTGA 753 0.6122 MAFSSTATATILPRSLAFASSTKLFVGQSLLRSSSPRFLSFPTPKTNPRNRLIVSLQSPRAHSSASPSTSATFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPASYATRFVEPGEIKTKYAIVIGGANFGCGSSREHAPVALGASGVSAVVAESYARIFFRNSVATGEVYPLESESRLCDECTTGDVVTIELGGSRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARNTGMIPSN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02402 250 NCBIfam 3-isopropylmalate dehydratase, small subunit 77 243 IPR011827 GO:0016836
Spst4g02402 250 CDD IPMI_Swivel 79 206 IPR033940 -
Spst4g02402 250 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 69 248 - -
Spst4g02402 250 Gene3D Aconitase, domain 4 70 246 IPR015928 -
Spst4g02402 250 SUPERFAMILY LeuD/IlvD-like 73 247 - -
Spst4g02402 250 FunFam Isopropylmalate/citramalate isomerase small subunit 69 246 - -
Spst4g02402 250 Pfam Aconitase C-terminal domain 135 181 IPR000573 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02402 K01704 - gmx:100782688 383.645