Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02385 ATGATGGGTTCCCAAACAGTTTGCAAGGTTCCTGCTGTTGACTTCACCGATGAAGAGTTGAAACCTGGTACAGCAAAGTGGGCTTCAGCATGCCAAGTGATCCGGGGTGCACTTGAGGATCATGGTTGTTTCTATGCTTTGTATGATAAAGTTTCCATGGAGCTTTACAACTCAGTTTTTATTCTAATGGAAGAACTATTTGATCTTCCATTGGAAACAAAACTGCAAAAGATCAGTGACAAACCCTACCATGGTTATTATGGACAAAATGTTCATGTCCCTCTATATGAATCCCTAGGGATCAATGATCCATTGACCATGGAAGGAGTTCAAAACTTCACCAAACTAATGTGGCCAGCAGGATATGATCATTTCTGCGAGACTCTCGGTCTCTATGCAAAGCTGGTTGTAGAATTGGATCACATGACTAAAAGAATGGTGTGTGATGGCTATGGATTGGAGCAAAAGAACTGTGATTCTCTTCTGGAATCAACAAAGTACATGCTTCGGAGCTTCAAATATAGACTGCCGCAGAAGGATGAAAATAACTTGGGATTGCATGCTCACACGGACACATCCTTCTTCACCATTTTGCATCAGAATAATGTAAATGGTCTGCAAGTAAAATTGAAAAATGGAGAGTGGACTGATATTGATCTCTCTCCCTTCATGTTTCTGATCCTGGCAGGCGATGCATTTAAGGTTTGGAGTAACGATAGGATACAGTGTTGTGAACACCGAGTGATTATAAGTGAAAAGAAGGAAAGATATTCGATGGGACTATTTTCACTTGGTGGGAAGCTGGTTGAAACACCAGAAGAGCTTGTTGATGAAGAACATCCAAGACGTTATAAACCATTTGATCATTATGAATACCTACGTTTCTATGCAACCAAAAAGGCCCTTGAATCCAAGTCTCGAATCAAAGCATTCTGCGCCATAGACTATGCTGATGAAAACTGA 963 0.4081 MMGSQTVCKVPAVDFTDEELKPGTAKWASACQVIRGALEDHGCFYALYDKVSMELYNSVFILMEELFDLPLETKLQKISDKPYHGYYGQNVHVPLYESLGINDPLTMEGVQNFTKLMWPAGYDHFCETLGLYAKLVVELDHMTKRMVCDGYGLEQKNCDSLLESTKYMLRSFKYRLPQKDENNLGLHAHTDTSFFTILHQNNVNGLQVKLKNGEWTDIDLSPFMFLILAGDAFKVWSNDRIQCCEHRVIISEKKERYSMGLFSLGGKLVETPEELVDEEHPRRYKPFDHYEYLRFYATKKALESKSRIKAFCAIDYADEN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02385 320 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 88 IPR026992 -
Spst4g02385 320 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 3 301 - -
Spst4g02385 320 Gene3D - 8 318 IPR027443 -
Spst4g02385 320 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 266 IPR005123 -
Spst4g02385 320 SUPERFAMILY Clavaminate synthase-like 6 299 - -
Spst4g02385 320 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 294 - -
Spst4g02385 320 Pfam 2OG-Fe(II) oxygenase superfamily 173 262 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02385 Spst-Chr4 64397343 64398614 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02385 132 311 Glycosyltransferase AT5G59530 29.412 2.57e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02385 - - gmx:100794707 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02385 4 64397343 64398614 Spst4g02385 4 64397343 64398614 ECH