Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02384 ATGGGTTCAGGAGACACTCTAAAGCTTCCAGTAATCGACTTTACTGACCTCAAATTGGAAGCCAACAACCCTAATTGGGAGGCAGTAAAATCCCAAGTCCACAAGGCACTAGTAGAGTATGGTTGCTTTGAAGCAATTTTTCATAAAGTTCCTTTAGACCTTATGAAAGCCATATTTGGTGCACTGCAAGAACTCTTTGATCTCCCTCTACAAACAAAGATACTCAATGTGTCTCAGAAGCCCTATCATGGCTATGTTGGGCAATATCCTATGGTCCCACTGTATGAAAGCATGGGCATTGACGATGCCAATGTCTATGAGAAAGTAGAAAGCATGACCAACATCATGTGGCCTAATGGAAACCCGAGTTTTAGCAAAACTATACAATCCTTCTCTGAGCAGTTATCAGAGTTGGATCAGATTATAAGGAAGATGGCTTTGGAGAGCTTAGGTGTTGAGAATTACTTGGAGGAACACATGAACTCAACCAATTATCTTCTCCGAGTTATGAAATACAAAGGCCCTCAAACCAGTGACACCAAACTAGGGCTCAGCACACACACAGACAAGAACATAGTGACCATATTGTGTCAGAACGAAGTGGAGGGTTTAGAGGTGTTGACCAAAGATGGAAAATGGATAAGCTACAAGCCTTCTTCCCCTGACAGTTTCGTTGCCATGATTGGTGACTCTCTCCATGCATGGTCAAATGGGAGGTTTCATTCACCCTTTCACCGAGTGATGATGAGTGGGAATGAGGCAAGATATTCTGCAGGGTTGTTCTCCGTCCCCAAAGGAGGGAAGATTATAAAAGCCCCAGAGGAGCTGGTGGATGAGGAACACCCTCTGCTTTTCAAACCCTACGATCACGTTGAGTTCCTCAAGTATTACTACACTGAACAAGGCCAGAGAGAGCAATTTGCACTGCACACTTACTGTGGTGTTTGA 948 0.4388 MGSGDTLKLPVIDFTDLKLEANNPNWEAVKSQVHKALVEYGCFEAIFHKVPLDLMKAIFGALQELFDLPLQTKILNVSQKPYHGYVGQYPMVPLYESMGIDDANVYEKVESMTNIMWPNGNPSFSKTIQSFSEQLSELDQIIRKMALESLGVENYLEEHMNSTNYLLRVMKYKGPQTSDTKLGLSTHTDKNIVTILCQNEVEGLEVLTKDGKWISYKPSSPDSFVAMIGDSLHAWSNGRFHSPFHRVMMSGNEARYSAGLFSVPKGGKIIKAPEELVDEEHPLLFKPYDHVEFLKYYYTEQGQREQFALHTYCGV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02384 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 264 IPR005123 -
Spst4g02384 315 Gene3D - 7 312 IPR027443 -
Spst4g02384 315 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 302 - -
Spst4g02384 315 SUPERFAMILY Clavaminate synthase-like 5 301 - -
Spst4g02384 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Spst4g02384 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 295 - -
Spst4g02384 315 Pfam 2OG-Fe(II) oxygenase superfamily 159 261 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02384 Spst-Chr4 64391493 64392694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02384 7 298 Glycosyltransferase AT5G59530 24.585 5.25e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02384 - - gmx:100784444 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02384 4 64391493 64392694 Spst4g02384 4 64391493 64392694 ECH