Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02366 ATGTTTCGGTGGCTGTTGAAGCCCAGGTTCTATTCAAAATGCTTGTCTTACGTGAAGCTTGTGAAGACTCGGCTAGAGATAATACAGAAGAAGAAGAAAGCAGTTCAGAAGTTTTTGAGGAGTGACATCGCAGAGCTTCTTAGGAGTGGCCTTGAATATGATGCATACATGAGGGCTGAAGGGCTTCTGTTCGAGCAGAAAATGTTATCTTGCTATGAACTCATTGAAAAGTTTGTTGGGTGCATATCAGATCATGTTGAAGACCTAACTAAGCAGCAGGATTGCCCTGATGAATGCAAGGAAGCTGTGCCATCATTGATGTATGCTGCTGCAAGATTTGCTGATCTGCCCGAATTGCGTGACCTCAGAACATTATTTACAGAGAAATTTGGGAATTCTCTTGAACCATATATAAACAAAGAGTTTGTTGAGAGGCTGAGGCGAGATCCGCCTACAAGAGAAATGAAGATTGGACTATTATATGATATAGCACAAGAGTTCTCTATAAAATGGGATGGCAACTCTTTGAGAGAAAGACTTTATACACAGTCGTCATTATGTGAAGAGAAGCCTATGCCTAGGGAAGACTTGAATAAATCAAAAGGAAAGGAAAGAAACAACCAACATCTAGAAAGGAAGGATTTAAATGATGACTCATGGATACACCAAAGCAGTAGCAGTGATGATGAAACAAGTCTGTCATCCCTCAATGGCCGAAAGGGTAGTAGTTCAAGTTCATTGGAAAGCATATCTGAGGATGAAGCTGAAACCAAGAGGTCAATTTCTTCCTATTGGCGCATTCCACCACCATACCTCAAACAAAAGACAAACAAAAGTGATTCAAAGAAAACAACACATGCTGACATTGAAGCACCAGATTCAGGTGGAATGAAACCAGGCAAAGAAAAACGTTATCCTTCCCAACAACCAGAACATGATACCGGGCAAAACAGAAGGCGTACAAGCTCACATGTCAGAGGAAAATCTCTTCCTTCCGAACCCACCACTGCAGTGGTAACATCAAATGGGCATACACGAACCATTTCCTTGGAATCAGGAATGAGGGGTGGTGCATGGCGTGTGCATCCAAATCTACCCGATTATGATGAACTGAGAGCTCGTCTTTTAGCTCTCAGACAGAGATAA 1146 0.4197 MFRWLLKPRFYSKCLSYVKLVKTRLEIIQKKKKAVQKFLRSDIAELLRSGLEYDAYMRAEGLLFEQKMLSCYELIEKFVGCISDHVEDLTKQQDCPDECKEAVPSLMYAAARFADLPELRDLRTLFTEKFGNSLEPYINKEFVERLRRDPPTREMKIGLLYDIAQEFSIKWDGNSLRERLYTQSSLCEEKPMPREDLNKSKGKERNNQHLERKDLNDDSWIHQSSSSDDETSLSSLNGRKGSSSSSLESISEDEAETKRSISSYWRIPPPYLKQKTNKSDSKKTTHADIEAPDSGGMKPGKEKRYPSQQPEHDTGQNRRRTSSHVRGKSLPSEPTTAVVTSNGHTRTISLESGMRGGAWRVHPNLPDYDELRARLLALRQR 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02366 381 MobiDBLite consensus disorder prediction 191 219 - -
Spst4g02366 381 Gene3D - 6 177 IPR042277 -
Spst4g02366 381 MobiDBLite consensus disorder prediction 191 357 - -
Spst4g02366 381 PANTHER IST1 FAMILY MEMBER 13 379 IPR005061 GO:0015031
Spst4g02366 381 MobiDBLite consensus disorder prediction 220 250 - -
Spst4g02366 381 MobiDBLite consensus disorder prediction 327 349 - -
Spst4g02366 381 Pfam Regulator of Vps4 activity in the MVB pathway 18 169 IPR005061 GO:0015031
Spst4g02366 381 MobiDBLite consensus disorder prediction 276 320 - -
Spst4g02366 381 FunFam Vacuolar protein sorting-associated protein IST1 6 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02366 Spst-Chr4 64245831 64248251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02366 - - gmx:102665874 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02366 4 64245831 64248251 Spst4g02366 4 64245831 64248251 ECH